Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq18 95.1 2e-14
>seq18
Length=597235
Score = 95.1 bits (104), Expect = 2e-14
Identities = 358/557 (64%), Gaps = 6/557 (1%)
Strand=Plus/Plus
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
|| || || ||| ||| || |||||||| | ||| | ||||||||||| || ||
Sbjct 244363 CAGGCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGG 244422
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780
|||||||| || |||||||| ||||| || ||||| ||||| | || || |||||
Sbjct 244423 CCGGGCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCGGAGAAGAAG 244482
Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCGCTGTCATGT 32837
|| || || || || |||||||| | || | || || | || || |||
Sbjct 244483 ATGCCCTCGACGGCGGCAAAGGCCACCAGGCGCTGGGCAAAGGTCGACTCGTGGTCGGCA 244542
Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897
|||||||| | ||||| |||||||| | || || || || || || || ||
Sbjct 244543 ATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTG 244602
Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957
|| || ||| | | || || | || || || || | || ||| |
Sbjct 244603 AACAGGTAGCTGCGCTGGGCGGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTC 244662
Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017
|| || || ||||| || || || || || ||||||||||| | ||||| | |||
Sbjct 244663 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGGATC 244722
Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077
|| || || | || || || | | || || || || || || || ||| |||
Sbjct 244723 TGGACCTCGCCTGAGAAGCGCTCAACCAGGTTCTCGTTGACAATGCCATCTGAGGCGGCA 244782
Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGT-CTGGT--GTTAGTTTATTCCAA 33134
|| || || | || || || || || ||||||| || || | | || |||||
Sbjct 244783 AAGAAGGCGAGGACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAG 244842
Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194
|| | || ||| || || | ||| | || || | ||||| || || ||||| |||||
Sbjct 244843 TCGTGGAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAGGACGCCTCGGCCTTC 244902
Query 33195 TTATACATATTCCAGAT 33211
|| ||||| | ||||||
Sbjct 244903 TTGTACATCTGCCAGAT 244919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631398049600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |