Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq3 125 6e-24
>seq3
Length=1108403
Score = 125 bits (138), Expect = 6e-24
Identities = 194/277 (70%), Gaps = 0/277 (0%)
Strand=Plus/Minus
Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431
|||| |||||| ||||| ||||||||| | || ||| |||||||||||||| | |||
Sbjct 700350 AACATGTGACACGGCGGCAGCGCCATCTTCTTCAGGTCTGCCGGGTTCCACGCGCTCATG 700291
Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491
||||| | || |||| ||| | || || | | ||| | || || || |||||
Sbjct 700290 ATGATGCGTCGGTCGTACGGCGTGTTCTTCAGCTTGTGCACCACGTCCGCCAGCTGGTCG 700231
Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551
| ||||||||||| ||||| | | ||| || || ||| | || || || || | ||||
Sbjct 700230 ACGCCCTGGCCTGTGTAGTCGGTCTGCGCATCGACATACTCGGCGCCGAAATGGCGCCAC 700171
Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCC 20611
||||| ||||| || || |||| || ||||| | ||| |||||||| | | |
Sbjct 700170 TGGAAGCCGTACACGGGGCCCAGGTCGCCCTCGGCGCGGTGGCCCAGGCCGACGCTGTCG 700111
Query 20612 AGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648
||| || | | || || || |||||| |||||||
Sbjct 700110 AGGTACGCGCGCGACCCGTTGCCGTCCCAGATCTTGA 700074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441372380695840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |