Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq3 125 6e-24 >seq3 Length=1108403 Score = 125 bits (138), Expect = 6e-24 Identities = 194/277 (70%), Gaps = 0/277 (0%) Strand=Plus/Minus Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 |||| |||||| ||||| ||||||||| | || ||| |||||||||||||| | ||| Sbjct 700350 AACATGTGACACGGCGGCAGCGCCATCTTCTTCAGGTCTGCCGGGTTCCACGCGCTCATG 700291 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491 ||||| | || |||| ||| | || || | | ||| | || || || ||||| Sbjct 700290 ATGATGCGTCGGTCGTACGGCGTGTTCTTCAGCTTGTGCACCACGTCCGCCAGCTGGTCG 700231 Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551 | ||||||||||| ||||| | | ||| || || ||| | || || || || | |||| Sbjct 700230 ACGCCCTGGCCTGTGTAGTCGGTCTGCGCATCGACATACTCGGCGCCGAAATGGCGCCAC 700171 Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCC 20611 ||||| ||||| || || |||| || ||||| | ||| |||||||| | | | Sbjct 700170 TGGAAGCCGTACACGGGGCCCAGGTCGCCCTCGGCGCGGTGGCCCAGGCCGACGCTGTCG 700111 Query 20612 AGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648 ||| || | | || || || |||||| ||||||| Sbjct 700110 AGGTACGCGCGCGACCCGTTGCCGTCCCAGATCTTGA 700074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372380695840