Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq5 91.5 1e-13
>seq5
Length=956377
Score = 91.5 bits (100), Expect = 1e-13
Identities = 98/127 (77%), Gaps = 2/127 (2%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-ATTGTCG 33968
|| || |||||||| || || ||| ||||||||| |||||||| || | || | || |
Sbjct 899870 AGACGAAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGG 899929
Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028
| |||| || | |||||||| ||||| |||||||||||||||||| || | || |||
Sbjct 899930 C-CGTCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGAGGAATGCCCTC 899988
Query 34029 TTTGTCC 34035
||||||
Sbjct 899989 CTTGTCC 899995
Score = 84.2 bits (92), Expect = 2e-11
Identities = 107/145 (74%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| ||||| || || || || ||| ||||||||| |||||||| || |
Sbjct 900145 ACCACCACGCAGACGCAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 900204
Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
|| | || || |||| || | |||||||| ||||| ||||| |||||||||||| |
Sbjct 900205 CAGAGTGCGGC-CGTCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCCGGAG 900263
Query 34019 GCACGCTCTCTTTGTCCATAATTTT 34043
| | | ||| |||||| ||| ||
Sbjct 900264 GAATACCCTCCTTGTCCTGAATCTT 900288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397062032220952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |