Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq18 107 4e-18
seq57 93.3 9e-14
>seq18
Length=597235
Score = 107 bits (118), Expect = 4e-18
Identities = 250/376 (66%), Gaps = 6/376 (2%)
Strand=Plus/Minus
Query 243353 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 243412
|||| || |||||||| || ||| ||||||| ||||| | || |||||| | |
Sbjct 244459 CCATTTTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCCAACGAGCTGA 244400
Query 243413 TCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGA 243472
| |||||||||||||| ||| | || | || | | || || || ||
Sbjct 244399 TTTCGCGCGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTC---GCACCTGA 244343
Query 243473 ACAAGCTACCATTCGAAACGGTCA---AACAAATCATCACAGAAGCAGTTGAAAACGAAA 243529
|||| | || | | | | ||| | |||||||||| || || || | | || |
Sbjct 244342 ACAACCGCCCCAGCAAGAAGCTCATTGAGGAAATCATCACTGATGCCGTCGTCATTGAGA 244283
Query 243530 AGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGG 243589
|||| ||| | || || | || ||| || | ||||||||| | || ||||||
Sbjct 244282 AGGAGTTCCTGACTGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGA 244223
Query 243590 GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGT 243649
|||||||| || || || |||||||| | | | || || || | || || || |
Sbjct 244222 AGCAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGTGGCCCTCGGCAACGAAAAGGTCT 244163
Query 243650 ACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709
|| ||||| ||||||||||| |||||||||| ||| ||||| || || || ||||
Sbjct 244162 ACCGCTCCACGAACCCCTTTGACTTTATGGAGAACATCTCGCTCGGTGGCAAGACCAACT 244103
Query 243710 TCTTCGAAAAGCGTGT 243725
|||| || ||||||||
Sbjct 244102 TCTTTGAGAAGCGTGT 244087
>seq57
Length=131118
Score = 93.3 bits (102), Expect = 9e-14
Identities = 481/743 (65%), Gaps = 56/743 (8%)
Strand=Plus/Plus
Query 333637 TGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGGTAAGGG 333696
||| |||||| ||||| |||||||||||||| | || ||| || | ||
Sbjct 85181 TGACACCCTCAAGGAAACCGGGCTCGGGGAAGGTGAACTCAATCTCCGAGGCACCCAGCT 85240
Query 333697 CGTAGTA--ACTCG-CTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGT 333753
||||||| ||| | | || ||| | |||||| |||||||| | ||| || || ||
Sbjct 85241 CGTAGTACGACTTGGCCGA---GGGGCACTTCTTGACGAACTCAGCCAGGTTACCACGGT 85297
Query 333754 ACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTG-CAAACAGCGTCGAGG 333812
| ||| ||||| | | | ||||| |||||||| | | || || || |||||||
Sbjct 85298 AGCGCTTAAGCTTGAAGC---GCTCGTAGTGGATAAT-GTGCTGGCAGACGTTGTCGAGG 85353
Query 333813 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGG----TTGATCAGGTA 333868
|| || |||||||| |||||||| | |||| || | | || ||| ||||||
Sbjct 85354 AAACCAGAGTCGTGAGACACAATGAT---CGAA--GTGC--AGGGCGAGTTGCACAGGTA 85406
Query 333869 TTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAG 333928
|| ||||||| | ||||| |||| ||||||||||| |||||||| ||||| ||
Sbjct 85407 GTCCTCCAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTGGGCTCGTCCAGAAGCAG 85466
Query 333929 TAGCTTTGCGTTCAGGAGCATTGCACGTGCA-AGAGCGAGTTTCATTTTCCACCCTCCTG 333987
| | | | | || | ||||| ||| ||||| || ||||| ||||| || || |
Sbjct 85467 AATATCGGGGGCCTCGAAGACGGCACG-GCACAGAGCCAGCTTCATCTTCCAACCACCAG 85525
Query 333988 AAAGAGTGTTAATTGGG--GCAGATTGGC-GCTCAATATCAAAGCC-AACCGATTCTAGA 334043
| |||| | ||| || || | |||| | ||||| ||| | || ||
Sbjct 85526 ACAGAGCGGAAATCTCACCGCTAATCATCTGCTCGGTG---AAGCCGAACTCAATC-AGC 85581
Query 334044 GTAGTTACGATCTTTTCA-----CGAG---AC-CAAATGTTTTCCTTTACTTGTTCATCA 334094
| |||| || || |||| || | | || ||| ||| |||||
Sbjct 85582 TGCTTGACGACCTCATCCTTGGTCGAGGTGACACCAGCGTCCTCCAG--CTTCTTCAT-- 85637
Query 334095 TTGGCAATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACG 334154
|| | |||||||| | | ||| | || |||| ||| || ||||| || |||
Sbjct 85638 --GG---TCCAGTCAATGGTGGTCATCTCAGTGTCGGCAGAGTCCAGGTCGTGCTCGACG 85692
Query 334155 TAAGCAGTTTTCAAAACATCCG-CAGA--GGGGAACCCTTCAAGCTGACCGTTCACAATA 334211
| | || || ||| || | | | |||||| || || | ||| |||| ||
Sbjct 85693 AAGACGGTCTT---AACCTCAGACTGCTTGGGGAAACCCTCGACCTGCTCGTTGTTGATG 85749
Query 334212 GCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCA 334271
|| ||||||||||| || || |||| ||||| || || |||||||||||||| | |||
Sbjct 85750 GCACGCATCAGAGTCGACTTGCCCGAACCGTTGGGACCGCACAGACCGTAGCGCTGGCCA 85809
Query 334272 CGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAAT 334331
|||||||| | | || | ||| || ||||| || |||| || ||||| || ||
Sbjct 85810 CGCTTCAGGCGCAGATGGGTCTGGTTAAGCAGAATCTTGGCACCGTAGGCCAGCGAGAAG 85869
Query 334332 TCACAATCACACAGATCCTCACC 334354
|| | ||||| ||||| ||
Sbjct 85870 GTGCAGTTGCACAGGTCCTCGCC 85892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102878926070600
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