Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq53 188 9e-43
seq18 141 1e-28
>seq53
Length=159929
Score = 188 bits (208), Expect = 9e-43
Identities = 855/1339 (64%), Gaps = 31/1339 (2%)
Strand=Plus/Plus
Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962
|||||||| ||||| || || || || | | | || || |||| || || |||
Sbjct 98085 TTGACAACCTGGAACTCGCCAGCCAGCACACGGCGCTGGTAAATGTTGGAAGTATACGGC 98144
Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022
|| |||||||| ||||| |||| || || | ||| ||| || ||||| || || |
Sbjct 98145 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGC 98204
Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAG 114082
|| || ||| || | ||| | | | | || | |||||||| | ||||||| ||
Sbjct 98205 AGCAGCGAGTTGCGCACACCATGCTGCTTGATCTGCTCCTTGAGCGATGCCCAGTCCCAG 98264
Query 114083 TTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGAT 114142
| | | | | | |||||| |||||||| || || || ||||| | |||||
Sbjct 98265 AGGTCGCTGGGCGTGACGTTCCACATGTCAAACTGCAGAATGCCCTGGGAAACAGGCGAG 98324
Query 114143 CCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCT 114202
||||| | || ||| | ||||| ||| ||| | || |||| || ||
Sbjct 98325 CCCTCGTACGTAGAGTACGTTCCCTCCTCCTGCGCAATCTCCATCGACGCCGTCAGAGCA 98384
Query 114203 GCGTGATACATTGTCTCAAAAATGCGAGCATTCA--TTGCCTTGGCCTCGTCGGAATCAA 114260
||||| || || |||||||| || | | || | |||| |||||| | || ||||
Sbjct 98385 GCGTGGTAGATGGTCTCAAAGATTTGCGTGTTGAGCTTGCGA--GCCTCGGCCGACTCAA 98442
Query 114261 ACGCGAGTCG--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGG 114318
| | | || || | || || ||||||| || || |||||||| | ||||| ||
Sbjct 98443 AAGGCATGCGAAGCGCCAAG--AAGGCATCCGCCAGGCCCTGGACACCAACACCAATAGG 98500
Query 114319 GCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGAT 114375
||| || | ||| || || | || ||| |||||| || || || ||
Sbjct 98501 GCGGTGGCGCATGTTGCTGTTCTGCGC---CTCGGGCACGGGGTAGTGGTTGACGTCAAT 98557
Query 114376 AACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA 114435
| | || || || || ||||| |||| || || ||||| | | | || |
Sbjct 98558 GATGCGGTTCAGGTTGCGCACAACTACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTA 98617
Query 114436 ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGA 114495
| | | | | |||| || || || || | || ||||| || ||||| |
Sbjct 98618 CTCGTTCTTGTTGTAGTCGACAAACGACGGCAGAGCCAGCGAAGCCAGGTTGCACACGGC 98677
Query 114496 GGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGT 114555
||||||| || |||||| ||||| ||||| |||| || || || |||||
Sbjct 98678 AACCTCATCCGGCGCACAGTACTCGATAATCTCCGTGCACAGGTTGGAGCTGCGGATGGT 98737
Query 114556 GCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGT 114615
||||| |||||| || || ||| ||| || |||||||| |||||| | || |
Sbjct 98738 GCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTT 98797
Query 114616 CCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGG 114674
|| ||||| || || | || ||||| || | ||| | | || | | || | | | ||
Sbjct 98798 GCCAGTCTCGGTCTGCGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTGATC-GAGG 98856
Query 114675 CGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGG 114734
| | || ||||||| |||||||||| ||| || || |||||||| || || |
Sbjct 98857 CACGACCGCGGCCCTCCTGCTCGTACTTTTCGTACAGCGCCTCAAACTCCTCGCCGTAGC 98916
Query 114735 CCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAA 114794
|| | || || || || | ||||| | |||| ||| | | | || ||| |
Sbjct 98917 AGTCGGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCAGCGTTCTTCTCGA 98976
Query 114795 CACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTT 114854
||||||||||||| ||||| |||||||| ||||| ||| ||||| || |||| | |
Sbjct 98977 CACGCTTCATGAACAGGTCAGGGATCCACAGAGCCAGGAAAAGATCACGGGCGCGAACCT 99036
Query 114855 CTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTT 114914
|||| | || || || |||| || | || || | | ||| ||||||||||| |
Sbjct 99037 CTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACGGCT 99096
Query 114915 CCAGGTACACCGCGATTG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCG 114968
||||||| | || | | || | ||| | | ||| |||||| || || | |
Sbjct 99097 CCAGGTAAATGGCAAAGGCACCGGGGCGCTT--GTTG-CCACCCTGGTCGACGTAGCGGG 99153
Query 114969 CTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCC 115028
| ||| ||||| || || ||||| |||||||| || | || || || || ||
Sbjct 99154 CAGTGTTGTTAAACACACGCAGCATGGGAATGATGCCGTTGGAGGTACCGTTGGTGCCGG 99213
Query 115029 GAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCA 115086
|| |||||| | |||| | || |||| | | ||| ||||| || |||
Sbjct 99214 CAATGTACGAGCC--CGTGGCGCGGATGCGGTGGACATTGAGACCGATACCACCCGCCAT 99271
Query 115087 CTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTT 115146
||| ||||| || || | |||| | |||| || || || |||||||| ||||
Sbjct 99272 CTTGGAGATCATAGCACAGGTCTTGAGGGTATCGTAAATGCCCTCAATCGAGTCCTCCTT 99331
Query 115147 ATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGG 115205
| ||| |||||||| ||||| || ||||| || |||||||||||||| || |
Sbjct 99332 CATGTCGACCAGGAAGCAAGACGACAGCTG-GGCCTGGGGCGTACCAGCGTTGAACAGCG 99390
Query 115206 TTGGTGTCGCGTGGATGAA 115224
| || | || ||| ||||
Sbjct 99391 TGGGCGAGGCATGGGTGAA 99409
>seq18
Length=597235
Score = 141 bits (156), Expect = 1e-28
Identities = 528/818 (65%), Gaps = 25/818 (3%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816
|||||| ||||| |||||||| |||||||| ||||| || || ||| ||| |||||||
Sbjct 244077 GTAGTCGCCAACACGCTTCTCAAAGAAGTTGGTCTTGCCA-CCGAGCGAGATGTTCTCCA 244135
Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGA 125870
|||| ||||| |||||| | ||| | | | |||| | | | | | |
Sbjct 244136 TAAAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTTTCGTTGCCGAGGGCCACC------A 244189
Query 125871 GGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGA 125930
| ||||| || | ||| |||||||||||| ||| || | |||||| |||| |
Sbjct 244190 GCAGACGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCA 244249
Query 125931 GGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGA 125990
|| || || || || || | |||| |||||||||| | ||||| || | ||
Sbjct 244250 GGGCGCAGGGCAGGGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCATCAGTGATGA 244309
Query 125991 TGGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAA 126050
| | | |||| | | | || | ||| || | |||||| |||||
Sbjct 244310 TTTCCTCAATGAGCTTCTTGCTGGGGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAGGCAA 244369
Query 126051 ACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCA 126110
| || ||| || |||||||| || || || || || || || ||| ||| || ||||
Sbjct 244370 AGTCGGTGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCA 244429
Query 126111 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCT 126170
| ||||| ||||| || ||||||||| | ||| | || ||||||||||| ||||
Sbjct 244430 TCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCGGAGAAGAAGATGCCCT 244489
Query 126171 CCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCAAACC 126227
| || || || || | || |||| ||||||| ||||| | || | ||| ||
Sbjct 244490 CGACGGCGGCAAAGGCCACCAGGCGCTGGGCAAAGG---TCGACTCGTGGTCGGCAATCC 244546
Query 126228 ACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA 126287
|||| | ||||| | ||||| ||| || || | ||| | ||| || | || |
Sbjct 244547 ACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTGAACA 244606
Query 126288 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 126347
| | | | | || || ||||||||| | || ||||| || || || |||
Sbjct 244607 GGTAGCTGCGCTGGGCGGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTCTCGG 244666
Query 126348 CGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 126406
||||| | | ||| || | ||| | ||||||| |||| || || |||||
Sbjct 244667 AGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGGATCTGG 244725
Query 126407 ACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 126466
||||| | | || | | | ||||| ||||| ||||| || | |||||
Sbjct 244726 ACCTCGCCTGAGAAGCGCTCAACCAGGTTCTCGTTGACAATGCCATCTGAGGCGGCAAAG 244785
Query 126467 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCG 126523
|| || |||| | | ||||| | || ||| | || ||||| || | |||||||||
Sbjct 244786 AAGGCGAGGACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCG 244845
Query 126524 TCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
| |||||||| || ||||| | |||||| || |||||
Sbjct 244846 TGGAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCA 244883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353032514080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |