Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq53 269 3e-67
>seq53
Length=159929
Score = 269 bits (298), Expect = 3e-67
Identities = 621/925 (67%), Gaps = 18/925 (2%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||| || |||||| |||||||| | ||| |||| |||
Sbjct 99577 AACTACCAGTACTTTGGCTTCAAGACCCTGGAGCGCTCGTACCTGTTGAAGCTGGACGGC 99518
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||||| || || || || | ||||| || || | || || ||| ||
Sbjct 99517 AAGATTGTCGAGCGTCCCCAGCACATGATTATGCGTGTGGCTGTTGGCATCTGGGGCGAC 99458
Query 93835 GACATGCCGAATGTTT--TGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGG 93892
| | | ||| | | | | | | || |||| | |||| | ||| |
Sbjct 99457 -AGA-GTCGATCGCGTCATTGAGACGTACAACCTCATGTCGAGCAAGTTCTTCACCCATG 99400
Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952
|| | || || ||||||||||| || || || | | ||| |||| || || ||||||
Sbjct 99399 CCTCGCCCACGCTGTTCAACGCTGGTACGCCCCAGGCCCAGCTGTCGTCTTGCTTCCTGG 99340
Query 93953 T-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
| ||| | |||| ||||| || || |||| ||| | ||||||| |||||| |
Sbjct 99339 TCGAC-ATGAAGGAGGACTCGATTGAGGGCATTTACGATACCCTCAAGACCTGTGCTATG 99281
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071
||||| || ||||| || ||||| ||| ||||||| | | || |||| ||| ||
Sbjct 99280 ATCTCCAAGATGGCGGGTGGTATCGGTCTCAATGTCCACCGCATCCGCGCCACGGGCTCG 99221
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| ||| ||||| || |||||||||||| || | || ||||| || || || |||
Sbjct 99220 TACATTGCCGGCACCAACGGTACCTCCAACGGCATCATTCCCATGCTGCGTGTGTTTAAC 99161
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || |||||||| ||||||||||| | | | ||| | || || | ||
Sbjct 99160 AACACTGCCCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATTTAC 99101
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| ||||| |||||||| || ||| | ||| | |||||||| ||||||||||||||
Sbjct 99100 CTGGAGCCGTGGCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAG 99041
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| || | ||| | || || ||| ||||| ||| | || ||||| || |||||
Sbjct 99040 GAAGAGGTTCGCGCCCGTGATCTTTTCCTGGCTCTGTGGATCCCTGACCTGTTCATGAAG 98981
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|| |||||||| ||| | | ||||| ||| | || ||||| || || || || ||| ||
Sbjct 98980 CGTGTCGAGAAGAACGCTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCC 98921
Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431
||| | || | ||||| | |||| | ||||| ||||| | ||||
Sbjct 98920 GACTGCTACGGCGAGGAGTTTGAGGCGCTGTACGAAAAGTACGA---GCAGG--AGGGCC 98866
Query 94432 AGGAAGGT-----TATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486
| || || | || |||||||||| | || |||| | ||| |
Sbjct 98865 GCGGTCGTGCCTCGATCAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAGGCGCAGACCG 98806
Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAG 94545
|||| || | || | ||| ||| |||||| | ||| |||| |||| ||||||| ||
Sbjct 98805 AGACTGGCAACCCGTTCATGCTGTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAG 98747
Query 94546 CACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCG 94605
|||| || ||| ||||| || |||||||| |||||| ||||||| | | |||
Sbjct 98746 AACCTGGGCACCATCCGCAGCTCCAACCTGTGCACGGAGATTATCGAGTACTGTGCGCCG 98687
Query 94606 GACGAGATTGCTGTGTGTAACCTGG 94630
|| ||| |||| ||||| |||||||
Sbjct 98686 GATGAGGTTGCCGTGTGCAACCTGG 98662
Score = 145 bits (160), Expect = 8e-30
Identities = 264/383 (69%), Gaps = 4/383 (1%)
Strand=Plus/Minus
Query 94993 CAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAA 95052
||||||||| | ||||| ||| | ||| || | |||| | || | ||||||| |
Sbjct 98311 CAGGGCATTCTGCAGTTTGACATGTGGAACGTCACGCCCAGCGACCTCTGGGACTGGGCA 98252
Query 95053 --GCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCA 95110
|||| | | || ||| | || || |||||| ||| ||||||| | || || |
Sbjct 98251 TCGCTCAAGGAGCAGATCA-AGCAG-CATGGTGTGCGCAACTCGCTGCTGCTTGCGCCGA 98194
Query 95111 TGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCT 95170
|||| |||||| |||| ||||||| || ||||||||||||| ||||| || | || |
Sbjct 98193 TGCCGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCGTATACTT 98134
Query 95171 CCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCC 95230
||||| | ||| | | || ||||| || || || |||| || ||||| | || |
Sbjct 98133 CCAACATTTACCAGCGCCGTGTGCTGGCTGGCGAGTTCCAGGTTGTCAACCCGTGGCTGC 98074
Query 95231 TACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCG 95290
| || ||| || | |||||| ||||| || || | ||||||| | | |
Sbjct 98073 TGCGCGACTTGGTGGACCTGGGTCTGTGGTCGGATAACATGAAGAACCGCATCATTGCGG 98014
Query 95291 CCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGA 95350
||||| || |||||||||| || || || || ||||||||| ||| |||||||
Sbjct 98013 AGAACGGGTCGATCCAGAACATTCCCAGCATCCCCGATGACATCAAGATGCTGTACAAGA 97954
Query 95351 CCGTGTGGGAGATCCCGCAGCGC 95373
| ||||||||||| ||||||||
Sbjct 97953 CGGTGTGGGAGATTTCGCAGCGC 97931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722730012960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |