Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq53 86.0 6e-12
>seq53
Length=159929
Score = 86.0 bits (94), Expect = 6e-12
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 124098 GGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTT 124157
|| ||| |||||| ||||||||||| | || || | | | ||||||||| || |
Sbjct 98308 GGCATTCTGCAGTTTGACATGTGGAACGTCACGCCCAGCGACCTCTGGGACTGG-GCATC 98250
Query 124158 TTAAAACAACGCATATCGAC--GCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGC 124215
|| | ||| ||| | ||| ||| |||| ||||||||| || | ||| ||||
Sbjct 98249 GCTCAAGGA-GCAGATCAAGCAGCATGGTGTGCGCAACTCGCTGCTGCTTGCGCCGATGC 98191
Query 124216 CGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACA 124275
||||||| | ||| | || ||| | || |||||||| | ||||||||||| ||| ||
Sbjct 98190 CGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCGTATACTTCCA 98131
Query 124276 ATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGT 124315
| | ||| ||| || ||| | || ||||| || || ||
Sbjct 98130 ACATTTACCAGCGCCGTGTGCTGGCTGGCGAGTTCCAGGT 98091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002770596960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |