Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq53 86.0 6e-12 >seq53 Length=159929 Score = 86.0 bits (94), Expect = 6e-12 Identities = 153/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 124098 GGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTT 124157 || ||| |||||| ||||||||||| | || || | | | ||||||||| || | Sbjct 98308 GGCATTCTGCAGTTTGACATGTGGAACGTCACGCCCAGCGACCTCTGGGACTGG-GCATC 98250 Query 124158 TTAAAACAACGCATATCGAC--GCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGC 124215 || | ||| ||| | ||| ||| |||| ||||||||| || | ||| |||| Sbjct 98249 GCTCAAGGA-GCAGATCAAGCAGCATGGTGTGCGCAACTCGCTGCTGCTTGCGCCGATGC 98191 Query 124216 CGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACA 124275 ||||||| | ||| | || ||| | || |||||||| | ||||||||||| ||| || Sbjct 98190 CGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCGTATACTTCCA 98131 Query 124276 ATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGT 124315 | | ||| ||| || ||| | || ||||| || || || Sbjct 98130 ACATTTACCAGCGCCGTGTGCTGGCTGGCGAGTTCCAGGT 98091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002770596960