Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq53 187 3e-42
seq18 145 9e-30
>seq53
Length=159929
Score = 187 bits (206), Expect = 3e-42
Identities = 853/1337 (64%), Gaps = 27/1337 (2%)
Strand=Plus/Plus
Query 115864 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGC 115923
|||||||| ||||| || || || || | | | || ||||||| || || |||
Sbjct 98085 TTGACAACCTGGAACTCGCCAGCCAGCACACGGCGCTGGTAAATGTTGGAAGTATACGGC 98144
Query 115924 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 115983
|| |||||||| ||||| |||| || || | ||| ||| || ||||| || || |
Sbjct 98145 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGC 98204
Query 115984 AGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAG 116043
|| || |||||| | ||| | | | || | |||||||| | ||||||| ||
Sbjct 98205 AGCAGCGAGTTGCGCACACCATGCTGCTTGATCTGCTCCTTGAGCGATGCCCAGTCCCAG 98264
Query 116044 TTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGAT 116103
| | | | | | |||||| |||||||| || || || ||||| | |||||
Sbjct 98265 AGGTCGCTGGGCGTGACGTTCCACATGTCAAACTGCAGAATGCCCTGGGAAACAGGCGAG 98324
Query 116104 CCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCT 116163
||||| | || || | ||||| ||| ||| | || |||| || ||
Sbjct 98325 CCCTCGTACGTAGAGTACGTTCCCTCCTCCTGCGCAATCTCCATCGACGCCGTCAGAGCA 98384
Query 116164 GCGTGATACATTGTCTCAAAAATGCGAGCATTCA--TTGCCTTGGCCTCGTCGGAATCAA 116221
||||| || || |||||||| || | | || | |||| |||||| | || ||||
Sbjct 98385 GCGTGGTAGATGGTCTCAAAGATTTGCGTGTTGAGCTTGCGA--GCCTCGGCCGACTCAA 98442
Query 116222 ACGCGAGACG--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGG 116279
| | | || || | || || ||||||| || || |||||||| | ||||| ||
Sbjct 98443 AAGGCATGCGAAGCGCCAAG--AAGGCATCCGCCAGGCCCTGGACACCAACACCAATAGG 98500
Query 116280 GCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGAT 116336
||| || | ||| || || | || ||| |||||| || || || ||
Sbjct 98501 GCGGTGGCGCATGTTGCTGTTCTGCGC---CTCGGGCACGGGGTAGTGGTTGACGTCAAT 98557
Query 116337 AACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA 116396
| | || || || || ||||| |||| || || ||||| | | | || |
Sbjct 98558 GATGCGGTTCAGGTTGCGCACAACTACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTA 98617
Query 116397 ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGA 116456
| | | | | |||| || || || || | || ||||| || ||||| |
Sbjct 98618 CTCGTTCTTGTTGTAGTCGACAAACGACGGCAGAGCCAGCGAAGCCAGGTTGCACACGGC 98677
Query 116457 GGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGT 116516
||||||| || |||||| ||||| ||||| |||| || || || |||||
Sbjct 98678 AACCTCATCCGGCGCACAGTACTCGATAATCTCCGTGCACAGGTTGGAGCTGCGGATGGT 98737
Query 116517 GCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGT 116576
||||| |||||| || || ||| ||| || |||||||| ||||| | || |
Sbjct 98738 GCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTT 98797
Query 116577 CCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGG 116635
|| ||||| || || | || ||||| || | ||| | | || | | || | | | ||
Sbjct 98798 GCCAGTCTCGGTCTGCGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTGATC-GAGG 98856
Query 116636 CGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAG 116695
| | || ||||||| |||||||||| ||| || ||||||||||| || || ||
Sbjct 98857 CACGACCGCGGCCCTCCTGCTCGTACTTTTCGTACAGCGCCTCAAACTCCTCGCCGT-AG 98915
Query 116696 CC-TCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCA 116754
| || | || || || || | || || | |||| ||| | | | || |||
Sbjct 98916 CAGTCGGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCAGCGTTCTTCTCG 98975
Query 116755 ACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCT 116814
|| ||||||||||| ||||| |||||||| || ||| ||| ||||| || |||| |
Sbjct 98976 ACACGCTTCATGAACAGGTCAGGGATCCACAGAGCCAGGAAAAGATCACGGGCGCGAACC 99035
Query 116815 TCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGT 116874
||||| | || || || |||| || | || || | | ||| |||||||||||
Sbjct 99036 TCTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACGGC 99095
Query 116875 TCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCC 116931
|||||||| | || | | || ||| ||| |||||| || || | ||
Sbjct 99096 TCCAGGTAAATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCA 99155
Query 116932 GTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGA 116991
|| |||||| || || ||||| |||||||| || | || || || || || |
Sbjct 99156 GTGTTGTTAAACACACGCAGCATGGGAATGATGCCGTTGGAGGTACCGTTGGTGCCGGCA 99215
Query 116992 A--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACT 117049
| |||||| | |||| | || ||||| | | ||| ||||| || ||| ||
Sbjct 99216 ATGTACGAGCC--CGTGGCGCGGATGCGGTGGACATTGAGACCGATACCACCCGCCATCT 99273
Query 117050 TTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTAT 117109
| ||||| || || | |||| | |||| || || || |||||||| ||||
Sbjct 99274 TGGAGATCATAGCACAGGTCTTGAGGGTATCGTAAATGCCCTCAATCGAGTCCTCCTTCA 99333
Query 117110 TTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTT 117168
| ||| |||||||| ||||| || ||||| || |||||||||||||| || ||
Sbjct 99334 TGTCGACCAGGAAGCAAGACGACAGCTG-GGCCTGGGGCGTACCAGCGTTGAACAGCGTG 99392
Query 117169 GGTGTCGCGTGGATGAA 117185
|| | || ||| ||||
Sbjct 99393 GGCGAGGCATGGGTGAA 99409
>seq18
Length=597235
Score = 145 bits (160), Expect = 9e-30
Identities = 531/819 (65%), Gaps = 27/819 (3%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| || || |||||||| |||||||| ||||| ||| |||| ||| ||||||||
Sbjct 244077 GTAGTCGCCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGCGAGATGTTCTCCAT 244136
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGAG 127344
||| ||||| |||||| | ||| | | | |||| | | | | | ||
Sbjct 244137 AAAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTTTCGTTGCCGAGGGCCACC------AG 244190
Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404
||||| || | ||| |||||||||||| ||| || | |||||| |||| ||
Sbjct 244191 CAGACGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAG 244250
Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464
| || || || || || | |||| ||||||||||| | || || || | |||
Sbjct 244251 GGCGCAGGGCAGGGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCATCAGTGATGAT 244310
Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCA--CAG- 127520
| | ||| | | | || | ||| | | || | |||||| || |||
Sbjct 244311 TTCCTCAATGAGCTTCTTGCTGGGGCGGTTGT-TCAGGTGCGAGAAGAG---CAGGCAGG 244366
Query 127521 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 127580
|||| || ||| || |||||||| || || || || || || || ||| ||| || |
Sbjct 244367 CAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGGCCGG 244426
Query 127581 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 127640
|||| ||||| ||||| || ||||||||| | ||| | ||| ||||||||||| |
Sbjct 244427 GCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCGGAGAAGAAGATGC 244486
Query 127641 CCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAAC 127699
|||| || || || || | || |||| |||||||| || | | || ||| |
Sbjct 244487 CCTCGACGGCGGCAAAGGCCACCAGGCGCTGGGCAAAGG-TCGACTCGTGGTCGGCAATC 244545
Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAG 127759
||||| | ||||| | ||||| ||| || || | ||| | ||| || | ||
Sbjct 244546 CACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTGAAC 244605
Query 127760 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 127819
|| | | | | || || ||||||||| | || ||||| || || || |||
Sbjct 244606 AGGTAGCTGCGCTGGGCGGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTCTCG 244665
Query 127820 CCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 127878
||||| | | ||| || | ||| | ||||||| |||| || || |||||
Sbjct 244666 GAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGGATCTG 244724
Query 127879 TACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 127938
||||| | | || | | | ||||| ||||| ||||| || | |||||
Sbjct 244725 GACCTCGCCTGAGAAGCGCTCAACCAGGTTCTCGTTGACAATGCCATCTGAGGCGGCAAA 244784
Query 127939 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 127995
|| || |||| | | ||||| | || ||| | || ||||| || | ||||||||
Sbjct 244785 GAAGGCGAGGACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTC 244844
Query 127996 GTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
|| ||||||||| || ||||| | |||||| || |||||
Sbjct 244845 GTGGAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCA 244883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506617168160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |