Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq53 176 7e-39
>seq53
Length=159929
Score = 176 bits (194), Expect = 7e-39
Identities = 457/681 (67%), Gaps = 12/681 (2%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACATG 203896
|| |||||| |||||||| |||| | || | |||| ||||| | | ||| |||||||||
Sbjct 97736 CTGGTCCACAGTGAACTGGATGG-GCGCAGCAGCAG-CCTGCGTACGCAGGTAGTACATG 97793
Query 203897 CCGGTCTTTAGGCCCTTCTGCCA-CCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955
|| ||||| || ||| || ||| |||| | | ||||||| | | |||| || | |
Sbjct 97794 CCCGTCTTGAGACCCAGCTTCCAGCCCGCAAA-GTGCATGCTGGTAATCTTGCCCATGGT 97852
Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGC 204015
||||| |||||| ||||| || ||||| ||||| ||||| | | || || ||
Sbjct 97853 AGGGTCCTTCATGTGGATGTTGAGCGACTGCGACTGGTCAATGAACGCTCCGCGGTCGGC 97912
Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGG 204074
||||| | | || || ||||||||||||||||||||||||| ||| | ||| ||
Sbjct 97913 AGCCATCTGCACAACCGTGCGCTGCGAAATCTCCCACACCGTCTTGTACAGCATCT-TGA 97971
Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133
||| | || | || | || ||| ||||| ||||| || || || | | ||
Sbjct 97972 TGTCATCGGGGATG-CTGGGAATGTTCTGGATCGACCCGTTCTCCGCAATGATGCGGTTC 98030
Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| | | ||| ||||| |||| | || || |||| ||| |||||||
Sbjct 98031 TTCATGTTATCCGACCACAGACCCAGGTCCACCAAGTCGCGCAGCAGCCACGGGTTGACA 98090
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| ||| || || || | |||||| | || | | | |||| || | || |||||
Sbjct 98091 ACCTGGAACTCGCCAGCCAGCACACGGCGCTGGTAAATGTTGGAAGTATACGGCTCGAAG 98150
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
|||||||||||| | |||||| | ||||||||||| ||||| || || || |||||
Sbjct 98151 CACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGCAGCAGC 98210
Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGC-TTCAGAGAGGTCCAGTCGTGCATCGC 204372
|||||||||||||| | | | || | ||| | || || || | |||||| | |
Sbjct 98211 GAGTTGCGCACACCATGCTGCTTGATC-TGCTCCTTGAGCGATGCCCAGTCCCAGAGGTC 98269
Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTT 204432
||||| | ||| ||||||||| ||||| | ||||| || || || |||||
Sbjct 98270 GCTGGGCGTGACGTTCCACATGTCAAACTGCAGAATGCCCTGGGAAACAGGCGAGCCCTC 98329
Query 204433 GTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATA 204492
|||||| | || | ||||| | || | || ||| || | || || |
Sbjct 98330 GTACGTAGAGTACGTTCCCTCCTCCTGCGCAATCTCCATCGACGCCGTCAGAGCAGCGTG 98389
Query 204493 GTACATGGTCTCAAAGATCTG 204513
||| |||||||||||||| ||
Sbjct 98390 GTAGATGGTCTCAAAGATTTG 98410
Score = 138 bits (152), Expect = 2e-27
Identities = 459/694 (66%), Gaps = 25/694 (4%)
Strand=Plus/Plus
Query 204923 CCCACATGCTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATT 204982
|||| | || |||||| ||||||||| ||| ||||||||||| ||||||||| |
Sbjct 98739 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTTG 98798
Query 204983 CCGTTCTCCATCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTC 205042
|| |||| |||| | ||||||| | ||||| | | |||| | | | |
Sbjct 98799 CCAGTCTCGGTCTGCGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTGA-TCGAGGC 98857
Query 205043 ACGTACAT--CCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACA 205100
||| | |||| | |||||| ||| |||||||||| |||| || |||||
Sbjct 98858 ACGACCGCGGCCCTCCTG-CTCGTACTTTTCGTACAGCGCCTCAAACTCCTCGCCGTAGC 98916
Query 205101 CGTCCATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCA--CATCTGATCGTCTTT 205158
||| ||| || || || | ||||| |||||||||| ||| || | | || |||
Sbjct 98917 AGTCGGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCAGC-GTTCTTCTCG 98975
Query 205159 CACCCTCTCCATAAACAGGTCGCTGATCCACAG-GCCGTAAAACAGATCACGGGCCCTAA 205217
|| | || ||| |||||||| ||||||||| ||| ||| ||||||||||| | ||
Sbjct 98976 -ACACGCTTCATGAACAGGTCAGGGATCCACAGAGCCAGGAAA-AGATCACGGGCGCGAA 99033
Query 205218 TTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACG 205277
| || | || ||||||| || ||| || | | | |||||||||||||
Sbjct 99034 CCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACG 99093
Query 205278 GCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAG 205337
|||| | | | ||| | || || || | |||||| ||||||||||| || ||| |
Sbjct 99094 GCTCCAGGTAAATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGG 99153
Query 205338 TCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGT 205397
| ||| || || |||||||| || | | ||||||| ||| ||||| |||| |
Sbjct 99154 CAGTGTTGTTAAACACACGCAGCATGGGAATGATGCCGTTGGAGGTACCGTTGGTGCCGG 99213
Query 205398 TGATGGCCGAGCCTTCAGCCCTCA--CGTTGGAGAT---GGCCGCGCCAATCCCGCCAGA 205452
||| |||||| || | | || |||| || | ||| | | |||||||
Sbjct 99214 CAATGTACGAGCCCGTGGCGCGGATGCGGTGGACATTGAGACCGATACCA-CCCGCCA-- 99270
Query 205453 ACACTTGGCGATCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGT 205511
||||| |||| || || ||||| || || ||| ||||| | || || || |
Sbjct 99271 --TCTTGGAGATCATAGCACAGGTCTTG-AGGGTATCGTAAATGCCCTCAATCGAGTCCT 99327
Query 205512 CCGCCAGTGTC-ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAG 205570
|| || |||| ||||| |||| || | ||||| ||| | || || |||| |||
Sbjct 99328 CCTTCA-TGTCGACCAGGAAGCAAGACGACAGCTGGGCCTGGGGCGTACCAGCGTTGAAC 99386
Query 205571 AGCGTGGGGCTGGCGTGGCTGAAGCGCTT-CTCG 205603
|||||||| ||| ||| ||||| ||| ||||
Sbjct 99387 AGCGTGGGCGAGGCATGGGTGAAGAACTTGCTCG 99420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154444602560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |