Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq36 93.3 3e-13
>seq36
Length=308131
Score = 93.3 bits (102), Expect = 3e-13
Identities = 153/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143
||||| |||| | || |||| ||||| || |||||||||| ||| || || ||
Sbjct 257108 CCATCCTCAATGGTCAGCAGAGAGACATCGAAAGTACCACCACCCAGATCGAAGATCAGG 257049
Query 518144 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203
|| || || || || || |||||||| || |||| ||||||||||| ||
Sbjct 257048 ACGTTGCGCTCGCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCAGCAGTGGGC 256989
Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263
|| || || || | || ||| |||||||| ||||| || || || || ||||| ||
Sbjct 256988 TCGTTGATGATACGCAGAACGTTAAGACCGGCAATAAGACCGGCGTCCTTGGTGGCCTGA 256929
Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304
| || |||||||| || || || || ||||| | |||||
Sbjct 256928 CGCTGAGAATCGTTGAAGTAGGCGGGGACAGTGACGACGGC 256888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780818628629656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |