Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq36 93.3 3e-13 >seq36 Length=308131 Score = 93.3 bits (102), Expect = 3e-13 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 ||||| |||| | || |||| ||||| || |||||||||| ||| || || || Sbjct 257108 CCATCCTCAATGGTCAGCAGAGAGACATCGAAAGTACCACCACCCAGATCGAAGATCAGG 257049 Query 518144 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 || || || || || || |||||||| || |||| ||||||||||| || Sbjct 257048 ACGTTGCGCTCGCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCAGCAGTGGGC 256989 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 || || || || | || ||| |||||||| ||||| || || || || ||||| || Sbjct 256988 TCGTTGATGATACGCAGAACGTTAAGACCGGCAATAAGACCGGCGTCCTTGGTGGCCTGA 256929 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 | || |||||||| || || || || ||||| | ||||| Sbjct 256928 CGCTGAGAATCGTTGAAGTAGGCGGGGACAGTGACGACGGC 256888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780818628629656