Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq53 194 2e-44
seq18 89.7 6e-13
seq7 84.2 3e-11
>seq53
Length=159929
Score = 194 bits (214), Expect = 2e-44
Identities = 835/1306 (64%), Gaps = 43/1306 (3%)
Strand=Plus/Minus
Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764
|||| ||| || | || || || |||||||||||||| || |||| |||| |
Sbjct 99409 TTCACCCATGCCTCGCCCACGCTGTTCAACGCTGGTACGCCCCAGGCCCAGCTGTCGTCT 99350
Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824
|| ||||| | | | |||||||| || || | |||||||||| || ||||
Sbjct 99349 TGCTTCCTGGTCGACATGAAGGAGGACTCGATTGAGGGCATTTACGATACCCTCAAGACC 99290
Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884
||||| ||||| ||| ||| ||||||||||| | | |||| || | |||
Sbjct 99289 TGTGCTATGATCTCCAAGATGGCGGGTGGTATCGGTCTCAATGTCCACCGCATCCGCGCC 99230
Query 111885 AACAAGTCTCGTA--TTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTC 111942
| | |||||| || || || || ||| || | || || ||||| ||||| |
Sbjct 99229 ACG--GGCTCGTACATTGCCGGCACCAACGGTACCTCCAACGGCATCATTCCCATGCTGC 99172
Query 111943 GCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGAT 111996
| || |||||| ||| || ||||| || |||| | ||| ||| | | ||
Sbjct 99171 GTGTGTTTAACAACACTGCCCGCTACGTCGACCAGGGTGGCAACAAGCGCCCC---GGTG 99115
Query 111997 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 112056
| | || | || || ||||| |||||||| ||| | | ||||||||||| ||||
Sbjct 99114 CCTTTGCCATTTACCTGGAGCCGTGGCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCA 99055
Query 112057 TCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 112116
||||| || | || |||| || ||| ||||| ||| ||||| ||||| || |
Sbjct 99054 AGAACCACGGCAAGGAAGAGGTTCGCGCCCGTGATCTTTTCCTGGCTCTGTGGATCCCTG 98995
Query 112117 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGG 112176
| || ||||||||| | || ||| ||| | | ||| |||| | || || || ||
Sbjct 98994 ACCTGTTCATGAAGCGTGTCGAGAAGAACGCTGACTGGACTCTGATGTGCCCCAACGAGT 98935
Query 112177 CACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236
|| || || |||| | || ||||||||||| || || ||| ||||||||||
Sbjct 98934 GCCCTGGCCTGGCCGACTGCTACGGCGAGGAGTTTGAGGCGCTGTACGAAAAGTACGAGC 98875
Query 112237 AAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAG 112295
| || | || | ||| || | | || | || | ||||| | || ||||| ||
Sbjct 98874 AGGAGGGCCGCGGTCGTGCCTCGAT-CAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAG 98816
Query 112296 TCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 112355
| || ||||||||||| | || | ||||| ||||| ||| ||| |||| |||||
Sbjct 98815 GCGCAGACCGAGACTGGCAACCCGTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGC 98756
Query 112356 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTT 112415
|| || ||||| |||| ||| || |||||||| || || || || | || |
Sbjct 98755 AACCAGAAGAACCTGGGCACCATCCGCAGCTCCAACCTGTGCACGGAGATTATCGAGTAC 98696
Query 112416 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTG 112475
| |||||| || ||||| ||||| || || | ||||| || || |||
Sbjct 98695 TGTGCGCCGGATGAGGTTGCCGTGTGCAACCTGGCTTCGCTGGCTCTGCCGTCGTTTGTC 98636
Query 112476 GA-TCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAA---AACTGT 112531
|| | || | || || | || | | || || ||||| || || || | |||
Sbjct 98635 GACTACAACAAGAACGA-GTACGACTTCCAGAAGCTGCACGAGGTCACCAAGGTAGTTGT 98577
Query 112532 -CACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTC 112587
| | ||||| ||| | | ||||| || |||||||| ||| || |
Sbjct 98576 GCGC----AACCTGAACCGCATCATTGACGTCAACCACTACCCCGTGCCCGAG---GCGC 98524
Query 112588 GTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTAT 112647
|| || ||| | ||||| || |||||| | |||||||| || || ||||||| |
Sbjct 98523 AGAACAGCAACATGCGCCACCGCCCTATTGGTGTTGGTGTCCAGGGCCTGGCGGATGCCT 98464
Query 112648 TCATTCTTTGTCGCCACGCA-----TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCG 112702
|| ||| ||| |||| ||||| || | ||| || | |||| |||
Sbjct 98463 TC-----TTGGCGCTTCGCATGCCTTTTGAGTCGGCCGAGGCTCGCAAGCTCAACACGCA 98409
Query 112703 TATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGA 112762
|| |||||||| || || ||||| ||||| |||| |||| | || ||| ||
Sbjct 98408 AATCTTTGAGACCATCTACCACGCTGCTCTGACGGCGTCGATGGAGATTGCGCAGGAGGA 98349
Query 112763 TGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATAT 112822
|| | || || | ||||| || || | ||| || || | || || ||||| ||
Sbjct 98348 GGGAACGTACTCTACGTACGAGGGCTCGCCTGTTTCCCAGGGCATTCTGCAGTTTGACAT 98289
Query 112823 GTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGG 112881
|| |||| || | || ||| | || ||||||| | |||||||| | ||||||
Sbjct 98288 GT-GGAACGTCACGCCCAGCGACCTCTGGGACTGGGCATCGCTCAAGGAGCAGATCAAGC 98230
Query 112882 AGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA 112941
|| | ||| | || ||| || || | || || ||||| || ||| ||| | || |
Sbjct 98229 AGCATGGTGTGCGCAACTCGCTGCTGCTTGCGCCGATGCCGACGGCCAGCACGTCGCAGA 98170
Query 112942 TCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987
| |||| || || || ||||| || || || || | ||||| ||
Sbjct 98169 TTCTGGGCAACAACGAGTGCTTCGAGCCGTATACTTCCAACATTTA 98124
>seq18
Length=597235
Score = 89.7 bits (98), Expect = 6e-13
Identities = 341/524 (65%), Gaps = 15/524 (3%)
Strand=Plus/Minus
Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873
||||| || || ||| | ||||| || |||||| | |||| ||||| | | | ||
Sbjct 244883 TGGACGGCCGAGGAGATTGATCTGTCCAAGGATCTCCACGACTGGAACAACCGCATGAAC 244824
Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933
| | |||||| | ||||| || |||| || |||||||| | || ||||| |||
Sbjct 244823 AAGGACGAAAAGTACTTCATCTCGCACGTCCTCGCCTTCTTTGCCGCCTCAGATGGCATT 244764
Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992
|| ||||| | | | ||| | | ||||| || |||| |||| || | |
Sbjct 244763 GTCAACGAGAACCTGGTTGAGCGCTTCTCAGGCGAGGTCCAGATCC-CTGAGGCCCGCTG 244705
Query 101993 TTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 102051
||||| | | || | |||| ||| | | | || ||||| ||| ||||
Sbjct 244704 CTTCTACGGCT-TCCAGATCATGATGGAGAACATCCACTCCGAGACGTACTCGCTGCTCA 244646
Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCAAACA 102110
| |||| ||| || ||||| || || | ||| | || || | |||||| | ||
Sbjct 244645 TCGACACGTACATCAAGGAGCCCGCCCAGC-GCAGCTACCTGTTCAACGCCATCGACACC 244587
Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTCG 102167
|||| || || | || || || ||||| | |||||| ||| || | |||||
Sbjct 244586 ATTCCCTGCATCCGCCGCAAGGCCGACTGGGCCCTCAAGTGGATTGCCGACCACGAGTCG 244527
Query 102168 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 102227
||||||| |||| || | || ||||| || ||||| ||||||||||| ||
Sbjct 244526 A---CCTTTGCCCAGCGCCTGGTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGC 244470
Query 102228 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287
|||| | | |||| ||||| ||||| ||||| ||||| || || ||| |||
Sbjct 244469 GCCTTTGCCTCCATTTTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCC 244410
Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|||||||| || || || |||||||| || ||| || |||||
Sbjct 244409 AACGAGCTGATTTCGCGCGACGAGGGCCTGCACACCGACTTTGC 244366
>seq7
Length=948245
Score = 84.2 bits (92), Expect = 3e-11
Identities = 156/227 (69%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123
|||||||||||| || || |||| |||||| || ||| | || || |||| |
Sbjct 403862 GGCATCAATCTCGTCGATAAAGATGATGCACGGCGCATTCTTACGTGCCGTGGCAAACAA 403921
Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAA 16181
||| || |||||| | |||||||| ||||||||||| ||||| | | | || ||
Sbjct 403922 ATCGCGCACACGCGACGGACCCACACCCACAAACATCTCGACAAACTCGGATCCGCTGAC 403981
Query 16182 CATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 16241
| || ||| || || || || || || |||| ||| || || ||||| |||
Sbjct 403982 GCT--GAAGAACGGCACGCCCGACTCGCCAGCCGTGGCCTTGGCCAGCAGCGTCTTGCCC 404039
Query 16242 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
||||| ||| |||| |||| || || || || |||||||||||
Sbjct 404040 GTACCGGGCGGGCCCGACAGGATCGCGCCACGCGGGATCTTGGCGCC 404086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741810294720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |