Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq53 194 2e-44 seq18 89.7 6e-13 seq7 84.2 3e-11 >seq53 Length=159929 Score = 194 bits (214), Expect = 2e-44 Identities = 835/1306 (64%), Gaps = 43/1306 (3%) Strand=Plus/Minus Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764 |||| ||| || | || || || |||||||||||||| || |||| |||| | Sbjct 99409 TTCACCCATGCCTCGCCCACGCTGTTCAACGCTGGTACGCCCCAGGCCCAGCTGTCGTCT 99350 Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824 || ||||| | | | |||||||| || || | |||||||||| || |||| Sbjct 99349 TGCTTCCTGGTCGACATGAAGGAGGACTCGATTGAGGGCATTTACGATACCCTCAAGACC 99290 Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884 ||||| ||||| ||| ||| ||||||||||| | | |||| || | ||| Sbjct 99289 TGTGCTATGATCTCCAAGATGGCGGGTGGTATCGGTCTCAATGTCCACCGCATCCGCGCC 99230 Query 111885 AACAAGTCTCGTA--TTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTC 111942 | | |||||| || || || || ||| || | || || ||||| ||||| | Sbjct 99229 ACG--GGCTCGTACATTGCCGGCACCAACGGTACCTCCAACGGCATCATTCCCATGCTGC 99172 Query 111943 GCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGAT 111996 | || |||||| ||| || ||||| || |||| | ||| ||| | | || Sbjct 99171 GTGTGTTTAACAACACTGCCCGCTACGTCGACCAGGGTGGCAACAAGCGCCCC---GGTG 99115 Query 111997 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 112056 | | || | || || ||||| |||||||| ||| | | ||||||||||| |||| Sbjct 99114 CCTTTGCCATTTACCTGGAGCCGTGGCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCA 99055 Query 112057 TCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 112116 ||||| || | || |||| || ||| ||||| ||| ||||| ||||| || | Sbjct 99054 AGAACCACGGCAAGGAAGAGGTTCGCGCCCGTGATCTTTTCCTGGCTCTGTGGATCCCTG 98995 Query 112117 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGG 112176 | || ||||||||| | || ||| ||| | | ||| |||| | || || || || Sbjct 98994 ACCTGTTCATGAAGCGTGTCGAGAAGAACGCTGACTGGACTCTGATGTGCCCCAACGAGT 98935 Query 112177 CACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236 || || || |||| | || ||||||||||| || || ||| |||||||||| Sbjct 98934 GCCCTGGCCTGGCCGACTGCTACGGCGAGGAGTTTGAGGCGCTGTACGAAAAGTACGAGC 98875 Query 112237 AAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAG 112295 | || | || | ||| || | | || | || | ||||| | || ||||| || Sbjct 98874 AGGAGGGCCGCGGTCGTGCCTCGAT-CAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAG 98816 Query 112296 TCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 112355 | || ||||||||||| | || | ||||| ||||| ||| ||| |||| ||||| Sbjct 98815 GCGCAGACCGAGACTGGCAACCCGTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGC 98756 Query 112356 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTT 112415 || || ||||| |||| ||| || |||||||| || || || || | || | Sbjct 98755 AACCAGAAGAACCTGGGCACCATCCGCAGCTCCAACCTGTGCACGGAGATTATCGAGTAC 98696 Query 112416 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTG 112475 | |||||| || ||||| ||||| || || | ||||| || || ||| Sbjct 98695 TGTGCGCCGGATGAGGTTGCCGTGTGCAACCTGGCTTCGCTGGCTCTGCCGTCGTTTGTC 98636 Query 112476 GA-TCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAA---AACTGT 112531 || | || | || || | || | | || || ||||| || || || | ||| Sbjct 98635 GACTACAACAAGAACGA-GTACGACTTCCAGAAGCTGCACGAGGTCACCAAGGTAGTTGT 98577 Query 112532 -CACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTC 112587 | | ||||| ||| | | ||||| || |||||||| ||| || | Sbjct 98576 GCGC----AACCTGAACCGCATCATTGACGTCAACCACTACCCCGTGCCCGAG---GCGC 98524 Query 112588 GTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTAT 112647 || || ||| | ||||| || |||||| | |||||||| || || ||||||| | Sbjct 98523 AGAACAGCAACATGCGCCACCGCCCTATTGGTGTTGGTGTCCAGGGCCTGGCGGATGCCT 98464 Query 112648 TCATTCTTTGTCGCCACGCA-----TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCG 112702 || ||| ||| |||| ||||| || | ||| || | |||| ||| Sbjct 98463 TC-----TTGGCGCTTCGCATGCCTTTTGAGTCGGCCGAGGCTCGCAAGCTCAACACGCA 98409 Query 112703 TATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGA 112762 || |||||||| || || ||||| ||||| |||| |||| | || ||| || Sbjct 98408 AATCTTTGAGACCATCTACCACGCTGCTCTGACGGCGTCGATGGAGATTGCGCAGGAGGA 98349 Query 112763 TGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATAT 112822 || | || || | ||||| || || | ||| || || | || || ||||| || Sbjct 98348 GGGAACGTACTCTACGTACGAGGGCTCGCCTGTTTCCCAGGGCATTCTGCAGTTTGACAT 98289 Query 112823 GTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGG 112881 || |||| || | || ||| | || ||||||| | |||||||| | |||||| Sbjct 98288 GT-GGAACGTCACGCCCAGCGACCTCTGGGACTGGGCATCGCTCAAGGAGCAGATCAAGC 98230 Query 112882 AGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA 112941 || | ||| | || ||| || || | || || ||||| || ||| ||| | || | Sbjct 98229 AGCATGGTGTGCGCAACTCGCTGCTGCTTGCGCCGATGCCGACGGCCAGCACGTCGCAGA 98170 Query 112942 TCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 | |||| || || || ||||| || || || || | ||||| || Sbjct 98169 TTCTGGGCAACAACGAGTGCTTCGAGCCGTATACTTCCAACATTTA 98124 >seq18 Length=597235 Score = 89.7 bits (98), Expect = 6e-13 Identities = 341/524 (65%), Gaps = 15/524 (3%) Strand=Plus/Minus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873 ||||| || || ||| | ||||| || |||||| | |||| ||||| | | | || Sbjct 244883 TGGACGGCCGAGGAGATTGATCTGTCCAAGGATCTCCACGACTGGAACAACCGCATGAAC 244824 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 | | |||||| | ||||| || |||| || |||||||| | || ||||| ||| Sbjct 244823 AAGGACGAAAAGTACTTCATCTCGCACGTCCTCGCCTTCTTTGCCGCCTCAGATGGCATT 244764 Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992 || ||||| | | | ||| | | ||||| || |||| |||| || | | Sbjct 244763 GTCAACGAGAACCTGGTTGAGCGCTTCTCAGGCGAGGTCCAGATCC-CTGAGGCCCGCTG 244705 Query 101993 TTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 102051 ||||| | | || | |||| ||| | | | || ||||| ||| |||| Sbjct 244704 CTTCTACGGCT-TCCAGATCATGATGGAGAACATCCACTCCGAGACGTACTCGCTGCTCA 244646 Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCAAACA 102110 | |||| ||| || ||||| || || | ||| | || || | |||||| | || Sbjct 244645 TCGACACGTACATCAAGGAGCCCGCCCAGC-GCAGCTACCTGTTCAACGCCATCGACACC 244587 Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTCG 102167 |||| || || | || || || ||||| | |||||| ||| || | ||||| Sbjct 244586 ATTCCCTGCATCCGCCGCAAGGCCGACTGGGCCCTCAAGTGGATTGCCGACCACGAGTCG 244527 Query 102168 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 102227 ||||||| |||| || | || ||||| || ||||| ||||||||||| || Sbjct 244526 A---CCTTTGCCCAGCGCCTGGTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGC 244470 Query 102228 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 |||| | | |||| ||||| ||||| ||||| ||||| || || ||| ||| Sbjct 244469 GCCTTTGCCTCCATTTTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCC 244410 Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||| || || || |||||||| || ||| || ||||| Sbjct 244409 AACGAGCTGATTTCGCGCGACGAGGGCCTGCACACCGACTTTGC 244366 >seq7 Length=948245 Score = 84.2 bits (92), Expect = 3e-11 Identities = 156/227 (69%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123 |||||||||||| || || |||| |||||| || ||| | || || |||| | Sbjct 403862 GGCATCAATCTCGTCGATAAAGATGATGCACGGCGCATTCTTACGTGCCGTGGCAAACAA 403921 Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAA 16181 ||| || |||||| | |||||||| ||||||||||| ||||| | | | || || Sbjct 403922 ATCGCGCACACGCGACGGACCCACACCCACAAACATCTCGACAAACTCGGATCCGCTGAC 403981 Query 16182 CATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 16241 | || ||| || || || || || || |||| ||| || || ||||| ||| Sbjct 403982 GCT--GAAGAACGGCACGCCCGACTCGCCAGCCGTGGCCTTGGCCAGCAGCGTCTTGCCC 404039 Query 16242 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||||| ||| |||| |||| || || || || ||||||||||| Sbjct 404040 GTACCGGGCGGGCCCGACAGGATCGCGCCACGCGGGATCTTGGCGCC 404086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741810294720