Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq53 185 1e-41
seq18 107 2e-18
>seq53
Length=159929
Score = 185 bits (204), Expect = 1e-41
Identities = 895/1400 (64%), Gaps = 45/1400 (3%)
Strand=Plus/Plus
Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994
|| ||||| | || || || || ||||| || || || |||| || || | ||| |
Sbjct 98124 TAAATGTTGGAAGTATACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTG 98183
Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054
|| || ||||| || || | || || ||| || | ||| | | |||||| | |||
Sbjct 98184 GCCGTCGGCATCGGCGCAAGCAGCAGCGAGTTGCGCACACCATGCTGCTTGATCTGCTCC 98243
Query 106055 TTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAG 106113
||||| ||||||| || | ||| || | || |||| |||| ||||| || ||
Sbjct 98244 TTGAGCGATGCCCAGTCCCAGAGGTCGCTGGGCGTGACGTTCC-ACATGTCAAACTGCAG 98302
Query 106114 CACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGC-CA 106172
| || ||||| || || ||||| | || || | || | || | || ||
Sbjct 98303 AATGCCCTGGGAAACAGGCGAGCCCTCGTACGTAGAGTACGTTCCCTC--CTCCTGCGCA 98360
Query 106173 ATTCACAGCT-CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 106231
|| || | |||| ||| | ||||| || ||||| |||||||| | | || | |
Sbjct 98361 ATCTCCATCGACGCCGTCAGAGCAGCGTGGTAGATGGTCTCAAAGATTTGCGTGTTGAGC 98420
Query 106232 TCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGA 106286
| || || | || ||||| |||| |||| || || ||||||| |
Sbjct 98421 TTGCGAGCCTCGGCCGACTCAAAAGGCATGCGAAGCGCCAAGAAGG-----CATCCGCCA 98475
Query 106287 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 106345
| || || ||||| | ||||||||| | ||| ||||| || || |||| |||
Sbjct 98476 GGCCCTGGACACCAACACCAATAGGGCGGTGGCGCATGTTGCTGTTCTGCGC---CTCGG 98532
Query 106346 --ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403
||||| || || |||||||| ||||| || || ||| | ||| ||||
Sbjct 98533 GCACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAGGTTGCGCACAACTACCTTGGTGA 98592
Query 106404 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 106463
|| || || || | | || | | | | | | |||| || || || |
Sbjct 98593 CCTCGTGCAGCTTCTGGAAGTCGTACTCGTTCTTGTTGTAGTCGACAAACGACGGCAGAG 98652
Query 106464 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 106523
| | || |||| ||||| || || ||||||| | |||||| | ||| || |
Sbjct 98653 CCAGCGAAGCCAGGTTGCACACGGCAACCTCATCCGGCGCACAGTACTCGATAATCTCCG 98712
Query 106524 TACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACG 106583
| |||| |||||| || || || |||| ||||| ||||| ||||| ||||||
Sbjct 98713 TGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGT 98772
Query 106584 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCC 106643
|||||||| |||||| | || | || ||||| ||||| | || ||||| || | ||
Sbjct 98773 GGTCCTTGTACAGCATGAACGGGTTGCCAGTCTCGGTCTGCGCCTCCAGAATGGCGTACC 98832
Query 106644 ACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAG 106702
||| | || | | || | | | ||| | || |||||| |||||||||| |||
Sbjct 98833 ACAGCTTCTGGGCCTTGATCGA-GGCACGACCGCGGCCCTCCTGCTCGTACTTTTCGTAC 98891
Query 106703 AGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA 106762
|| || ||||||||||| || ||||| || || || || || || || |
Sbjct 98892 AGCGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCACTCGTTGGGGCACATC 98951
Query 106763 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG-- 106820
|||| ||| | | | || ||| || ||||||||||| ||||| || |||||||| |
Sbjct 98952 AGAGTCCAGTCAGCGTTCTTCTCGACACGCTTCATGAACAGGTCAGGGATCCACAGAGCC 99011
Query 106821 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880
| |||| ||||| | ||| ||||||| | || ||||| || | |||||||
Sbjct 99012 AGGAAA--AGATCACGGGCGCGAACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGA 99069
Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGA 106936
|||| | | ||| |||||||| ||||| || || | || | | || | | |
Sbjct 99070 ACTCAAACACATCGGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCGGGGCGCTTGT 99129
Query 106937 CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATA 106996
| ||| | || | || ||||| || ||| |||||| || || ||||| ||||| ||
Sbjct 99130 TG-CCACCCTGGTCGACGTAGCGGGCAGTGTTGTTAAACACACGCAGCATGGGAATGATG 99188
Query 106997 CCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCATGGA 107054
|| | || ||| || || || || |||||| |||| | | ||||
Sbjct 99189 CCGTTGGAGGTACCGTTGGTGCCGGCAATGTACGAG--CCCGTGGCGCGGATGCGGTGGA 99246
Query 107055 TGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCAT 107114
| | || ||||| || ||| ||| ||||| ||||| | | || || | |
Sbjct 99247 CATTGAGACCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATCGT 99306
Query 107115 AGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC 107174
| || || | || ||||||||||| || ||| ||||||||| |||| ||| || |
Sbjct 99307 AAATGCCCTCAATCGAGTCCTCCTTCATGTCGACCAGGAAGCAAGACGACAGCTG-GGCC 99365
Query 107175 T-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACA 107231
| || |||||||| ||||| || || || | || || ||| | | |||| ||||
Sbjct 99366 TGGGGCGTACCAGCGTTGAACAGCGTGGGCGAGGCATGGGTGA--AGAACTTGCTCGACA 99423
Query 107232 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT-TCCCCGTGGATGCCGATGGCCACA 107290
| || ||| ||||| | ||| ||| | ||| || || |||||| | ||||||
Sbjct 99424 TGAGGTTGTACGTCTCAATGACGCGATCGA-CTCTGTCGCCCCAGATGCCAACAGCCACA 99482
Query 107291 CGCATAAACATGTATTGGGG 107310
||||||| ||||| |||||
Sbjct 99483 CGCATAATCATGTGCTGGGG 99502
>seq18
Length=597235
Score = 107 bits (118), Expect = 2e-18
Identities = 300/455 (66%), Gaps = 14/455 (3%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| ||||| ||||||||||||||||||||||| ||| | || ||||| ||||||
Sbjct 244078 TAGTCGCCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGCGAGATGTTCTCCATA 244137
Query 117046 AAGTCAAATGGATTCTTCG--CGTT---CCAAATGGGTGGC-ACCCCAACTTGTTTGAGG 117099
|||||||| || ||| | | || | || | | || | | | || ||
Sbjct 244138 AAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTTTCGTTGCCGAGGGCCACC------AGC 244191
Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159
||||| || | ||| |||||||||||| ||| || | |||||| |||| ||
Sbjct 244192 AGACGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGG 244251
Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219
|| || || || || | |||| | |||||||| | || || || | | |||
Sbjct 244252 GCGCAGGGCAGGGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCATCAGTGATGATT 244311
Query 117220 GCGTGGAT-AGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAA 117278
| | || || ||| | |||| | || || | ||||||| ||||||
Sbjct 244312 TCCTCAATGAGCTTCT-TGCTGGGGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAGGCAAA 244370
Query 117279 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCAT 117338
|| ||| || ||||| || || ||||| || || || || ||| ||||| |||||
Sbjct 244371 GTCGGTGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCAT 244430
Query 117339 GAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 117398
||||| ||||| || ||| |||| | | || | |||||||||||||| |||||
Sbjct 244431 CAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCGGAGAAGAAGATGCCCTC 244490
Query 117399 CACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433
|| ||||| || | ||||||| ||| ||||
Sbjct 244491 GACGGCGGCAAAGGCCACCAGGCGCTGGGCAAAGG 244525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980239518240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |