Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq36 91.5 1e-12 >seq36 Length=308131 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || || || || || || || ||||| || || || || || || | |||| Sbjct 256897 ACTGTCCCCGCCTACTTCAACGATTCTCAGCGTCAGGCCACCAAGGACGCCGGTCTTATT 256956 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || ||||| ||||| ||||| ||||| || || ||||||||||| |||| || || Sbjct 256957 GCCGGTCTTAACGTTCTGCGTATCATCAACGAGCCCACTGCTGCTGCCATTGCCTACGGT 257016 Query 550529 CTTGATAA 550536 ||||| || Sbjct 257017 CTTGACAA 257024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029291980777240