Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq53 403 3e-107
seq18 219 8e-52
>seq53
Length=159929
Score = 403 bits (446), Expect = 3e-107
Identities = 1009/1511 (67%), Gaps = 39/1511 (3%)
Strand=Plus/Plus
Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966
|||||||| | |||||| || || | ||||| | | |||||||| ||| ||||| ||
Sbjct 98082 GGGTTGACAACCTGGAACTCGCCAGCCAGCACACGGCGCTGGTAAATGTTGGAAGTATAC 98141
Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026
||||||| || ||||||||| ||||||||||| | |||||||| || ||||| || ||
Sbjct 98142 GGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCA 98201
Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086
| ||| || ||| | ||| || |||| ||| | | ||| ||||||||||
Sbjct 98202 AGCAGCAGCGAGTTGCGCACACCATGCTGCTTGATCTGCTCCTTGAGCGATGCCCAGTCC 98261
Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146
|| ||||| | | | |||||||||||||||||||||| ||||| | |
Sbjct 98262 CAG---------AGGTCGCTGGGCGTGACGTTCCACATGTCAAACTGCAGAATGCCCTGG 98312
Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206
|| || ||||| ||| | ||||| | || | ||||| || | ||| |||
Sbjct 98313 GAAACAGGCGAGCCCTCGTACGTAGAGTACGTTCCCTCCTCCTGCGCAATCTCCATCGAC 98372
Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266
||| ||| ||||||| ||||||||| ||||| || | | |||||||||| |||||
Sbjct 98373 GCCGTCAGAGCAGCGTGGTAGATGGTCTCAAAGATTTGCGTGTTGAGCTTGCGAGCCTCG 98432
Query 213267 GGGGACGTGAAGGGCATCATCATGCGTTG-GAACACATCAGCCAGCCCCTGGACCCCGAT 213325
| ||| || ||||| | ||| ||| |||| ||||| |||||||| || |
Sbjct 98433 GCCGACTCAAAAGGCATGCGAA-GCGCCAAGAAGGCATCCGCCAGGCCCTGGACACCAAC 98491
Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGC 213384
|| || || | ||| | || ||| || | || ||| || |||||| ||||
Sbjct 98492 ACCAATAGGGCGGTGGCGCATGTTGCTGTTCTGCGC-CTCGGGCACGGGGTAGTGGTTGA 98550
Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444
||| ||||| ||| |||||||| | || |||||||| | | ||| | || |
Sbjct 98551 CGTCAATGATGCGGTTCAGGTTGCGCACAACTACCTTGGTGACCTCGTGCAGCTTCTGGA 98610
Query 213445 GATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGC 213504
| | || ||| || | |||||| ||||| || | ||||||||||
Sbjct 98611 AGTCGTACTCGTTCTTGTTGTAGTCGACAAACGACGGCAGAGCCAGCGAAGCCAGGTTGC 98670
Query 213505 AAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATC 213564
| ||||| ||||| | | | |||||| || ||||| |||||||||||| || |
Sbjct 98671 ACACGGCAACCTCATCCGGCGCACAGTACTCGATAATCTCCGTGCACAGGTTGGAGCTGC 98730
Query 213565 GGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCCTTGTAGAGCATG 213623
|||||||||||||||||| ||||| ||| ||| | |||| |||||||| ||||||
Sbjct 98731 GGATGGTGCCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGGTCCTTGTACAGCATG 98789
Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTG 213683
| ||| || ||||| ||| | | |||| || | ||| || | | |||||||
Sbjct 98790 AACGGGTTGCCAGTCTCGGTCTGCGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTG 98849
Query 213684 ACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCG 213743
| | || ||| || | | | |||||||| |||||| ||| | | || ||
Sbjct 98850 ATCGAG-GCACGACCGCGGCCCTCCTG--CTCGTACTTTTCGTACAGCGCCTCAAACTCC 98906
Query 213744 TGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG 213803
| ||| || | |||| || || || ||| ||||| || ||||||| ||
Sbjct 98907 TCGCCGTAGCAGTCGGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCAGCG 98966
Query 213804 T-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCT 213862
| | |||| ||| | || |||||||||||| |||| |||||| || ||| || || |
Sbjct 98967 TTCTTCTC-GACACGCTTCATGAACAGGTCAGGGATCCACAGAGCCAGGAAAAGATCACG 99025
Query 213863 GGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGC 213922
|| | ||| ||| || ||| |||||||| || || || ||||| | || ||
Sbjct 99026 GGCGCGAACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAACACATCGGC 99085
Query 213923 GTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCAC 213979
|||||||||||||| ||| ||||||||||| || | || | ||||| |||||||| ||
Sbjct 99086 GTGCCACGGCTCCAGGTAAATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGAC 99145
Query 213980 CAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTT 214039
| ||| |||| || | ||||| | ||| | | |||||||| |||||
Sbjct 99146 GTAGCGGGCAGTGTTGTTAAACACACGCAGCATGGGAATGATGCCGTTGGAGGTACCGTT 99205
Query 214040 GGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATGGAGAGCCCTATGCCA 214097
||| || || || |||||||| | ||| | | | || ||| |||| || || |||
Sbjct 99206 GGTGCCGGCAATGTACGAGCCCGTGGCGCGGATGCGGTGGACATTGAGA--CCGATACCA 99263
Query 214098 CCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTG 214157
|| || |||||||||||| || ||| | | | || || ||||| | || |
Sbjct 99264 CCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATCGTAAATGCCCTCAATCGAG 99323
Query 214158 TCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTG 214217
|| || | | || | || |||||| ||| ||||||| | || || |||| ||||
Sbjct 99324 TCCTCCTTCATGTCGACCAGGAAGCAAGACGACAGCTGGGCCTGGGGCGTACCAGCGTTG 99383
Query 214218 AAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGG 214277
|| |||||||| ||||||| | | |||||| | || | ||| |||| ||||| | |
Sbjct 99384 AACAGCGTGGGCGAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATG 99443
Query 214278 AC-TGA--GGGGATGTCGTGCTTGTGGATCTGTAGAGCGCAC-CTCATCAGCATGTGCTG 214333
|| || | ||||| | ||| | ||| ||| | ||| | |||||||||
Sbjct 99444 ACGCGATCGACTCTGTCGCCC---CAGATGCCAACAGC-CACACGCATAATCATGTGCTG 99499
Query 214334 GGGCCTCTCTATGGGTCCTTTGGGGCC--CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTG 214391
||| | ||| | ||| | || ||| | |||||| ||||||||||| ||||||
Sbjct 99500 GGGACGCTCGA--CAATCTTGCCGTCCAGCTTCAACAGGTACGAGCGCTCCAGGGTCTTG 99557
Query 214392 AACCCAAAGTA 214402
|| ||||||||
Sbjct 99558 AAGCCAAAGTA 99568
>seq18
Length=597235
Score = 219 bits (242), Expect = 8e-52
Identities = 565/853 (66%), Gaps = 32/853 (4%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | |||||||||||||| ||||| || | | ||||||||||||
Sbjct 244074 CTGGTAGTCGCCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGCGAGATGTTCTC 244133
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGTGTC--AGGCCCATCTGTTC 47952
||| ||| |||||||| | | | || ||| ||| | ||| ||| |
Sbjct 244134 CATAAAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTTTCGTTGCCGAGGGCCA------C 244187
Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012
|||||| | || ||||| |||| ||||| | ||||||| | ||||||||| |
Sbjct 244188 CAGCAGACGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAG 244247
Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072
|||| ||||| |||| || || ||||||||||| || ||||| || |
Sbjct 244248 CAGGGCGCAGGGCAGGGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCATCAGTGAT 244307
Query 48073 AATCTGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCAT 48129
|| | || || | | || ||| || | ||||| ||||||| | ||||||
Sbjct 244308 GATTTCCTCAATGAGCTTCTTGCTGGGGCGGTTGTT---CAGGTGCGAGA---AGAGCAG 244361
Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189
|||||||||||| |||||| ||| ||||| || || ||| ||||||| ||| ||
Sbjct 244362 GCAGGCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAG 244421
Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249
|| ||||| | || | || ||||||||||| | || || | ||| ||||||||
Sbjct 244422 GCCGGGCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCGGAGAAGAA 244481
Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309
||||||||| || || || || || || | || | || | | | | ||| |
Sbjct 244482 GATGCCCTCGACGGCGGCAAAGGCCACCAGGCGCTGGGCAAAGGTCGACTCGTGGTCGGC 244541
Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369
||||| || |||||||| ||||| |||||| || || || || |||||
Sbjct 244542 AATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTT 244601
Query 48370 GAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAG---TGAGCAGCTTTGCGTA 48426
||| || | ||| || | | ||| | || || |||||||| | |||
Sbjct 244602 GAACAGGTAGCTGCGCTGGGCGGGCTCCTTGATGTACGTGTCGATGAGCAGC---GAGTA 244658
Query 48427 CATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAA 48486
| |||| ||||| | ||||| || ||||||||| ||||||||| | |||||||
Sbjct 244659 CGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGG 244718
Query 48487 CACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGC 48546
| ||| || || ||||| | ||| | ||| ||||| ||||| || |||||||| ||
Sbjct 244719 GATCTGGACCTCGCCTGAGAAGCGCTCAACCAGGTTCTCGTTGACAATGCCATCTGAGGC 244778
Query 48547 AGCAAAGAAGGCAAGGACATGT----TTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT 48602
||||||||||| ||||| || | ||| | | || || |||| || | |
Sbjct 244779 GGCAAAGAAGGCGAGGACGTGCGAGATGAAGTACTTTTCG-TCCTTGTTCATGCGGTTGT 244837
Query 48603 TCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTG 48662
||||| | || | || ||| ||| || | || || | |||||||||||||| |
Sbjct 244838 TCCAGTCGTGGAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAGGACGCCTCGG 244897
Query 48663 CTTTTTTGTACAT 48675
| || ||||||||
Sbjct 244898 CCTTCTTGTACAT 244910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931531915043840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |