Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq53 324 3e-83
seq18 246 6e-60
>seq53
Length=159929
Score = 324 bits (358), Expect = 3e-83
Identities = 968/1472 (66%), Gaps = 45/1472 (3%)
Strand=Plus/Plus
Query 221416 CGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTC 221472
|||||| |||||||||||||||||||||||||| | ||||||| |||| |||||
Sbjct 98375 CGTCAGAGCAGCGTGGTAGATGGTCTCAAAGATTTGCGTGTTGAG---CTTGCGAGCCTC 98431
Query 221473 GGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGAT 221532
|| || || ||||| || ||| | ||| | || ||||| ||||| || || |
Sbjct 98432 GGCCGACTCAAAAGGCATGCGAAGCGCCAAGAAGGCATCCGCCAGGCCCTGGACACCAAC 98491
Query 221533 ACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592
||| || || | ||| | | ||||| ||| || |||||||| || ||||||
Sbjct 98492 ACCAATAGGGCGGTGGCGCATGTTGCTGTTCTGCGCCTCGGGCACGGGGTAGTGGTTGAC 98551
Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652
||| || | ||| ||||| | | || || |||||| ||||||||||
Sbjct 98552 GTCAATGATGCGGTTCAGGTTGCGCACAACTACCTTGGTGACCTCGTGCAGCTTCTGG-- 98609
Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT 221712
|| | ||||| || || | || ||||| | || || |
Sbjct 98610 ----AAGTCGTACTCGTTCTTGTTGTAG------TCGACAAACGACGGCAGAGCCAGCGA 98659
Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772
|||||||| |||||||| ||||| ||| |||| || ||||| || || ||
Sbjct 98660 AGCCAGGTTGCACACGGCAACCTCATCCGGCGCACAGTACTCGATAATCTCCGTGCACAG 98719
Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCT 221831
|||| || |||||| ||||||| || || || |||||| ||| ||| | ||||
Sbjct 98720 GTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGGTCCT 98778
Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891
|||| ||||| || || ||||||||| ||| ||| ||||||| || ||| || |
Sbjct 98779 TGTACAGCATGAACGGGTTGCCAGTCTCGGTCTGCGCCTCCAGAATGGCGTACCACAGCT 98838
Query 221892 CTCTGGCGCTC-ACCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATACCCGGTATAGAG 221949
||||| || | || | ||| || ||||| || || ||| || ||
Sbjct 98839 -TCTGGGCCTTGATCGAGG-CACGACCGCGGCCCTC---CTGCTCGTACTTTTCGTACAG 98893
Query 221950 CATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAG 222009
| ||||||| || ||||| ||| ||||||| || ||| | ||| ||||||||
Sbjct 98894 CGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCACTCGTTGGGGCACATCAG 98953
Query 222010 ACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTG 222069
| |||||| ||| | | ||| | || |||||| ||||| ||||||||||| ||| |
Sbjct 98954 AGTCCAGTCAGCGTTCTTCTCGACACGCTTCATGAACAGGTCAGGGATCCACAGAGCCAG 99013
Query 222070 AAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129
|| ||||| | || || ||| ||| ||||| ||| || | ||| || | |||||
Sbjct 99014 GAAAAGATCACGGGCGCGAACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTC 99073
Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189
||| | || ||||||||||||||||| || | ||| | || ||||| |||||||||||
Sbjct 99074 AAACACATCGGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCGGGGCGCTTGTTGCC 99133
Query 222190 ACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGT 222248
|||||| || | | | ||| | ||| || | || || | || | | ||||
Sbjct 99134 ACCCTGGTCGA-CGTAGCGGGCAGTGTTGTTAAACACACGCAGCATGGGAATGATGCCGT 99192
Query 222249 TGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACA 222308
|||| |||||||||||| |||||||| || ||| | || | | || ||||
Sbjct 99193 TGGAGGTACCGTTGGTGCCGGCAATGTACGAGCCCGTGGCGC---GGATGC-GGTGGACA 99248
Query 222309 T----GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATG 222364
| ||||||||||| || || |||||||| || ||| ||||||| || ||
Sbjct 99249 TTGAGACCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATCGTAA 99308
Query 222365 ATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTG 222424
|||||||| || ||||||||||| | || | ||| || |||||||||| ||| | | |
Sbjct 99309 ATGCCCTCAATCGAGTCCTCCTTCATGTCGACCAGGAAGCAAGACGACAGCTGGGCCTGG 99368
Query 222425 GTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGA 222484
| | || ||||| ||||||||||| ||| || || ||| | || ||||| ||
Sbjct 99369 GGCGTACCAGCGTTGAACAGCGTGGGCGAGGCATGGGTGAAGAACTTGCTCGACATGAGG 99428
Query 222485 TCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTCAT 222543
| ||||||||| | ||| | ||| |||| ||| || | | | || | |||
Sbjct 99429 TTGTACGTCTCAATGACGCGATCGACTCTGTCGCCCCAGATGCCAACAGCCACA-CGCAT 99487
Query 222544 GTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGATTTT 222601
||||| |||||| | ||| ||| || | |||| | |||||||||
Sbjct 99488 AATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCCAGCT--TCAACAGGTACGAGCGC 99545
Query 222602 TCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCG 222661
||||| |||||||| |||||||| | | || ||||| | | ||| || | ||| | |
Sbjct 99546 TCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTACACAATGGCAGAG 99605
Query 222662 TCCAGCTCCGACTTGTGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCG 222721
||||||||| |||||| | | | ||||| | || || | | ||| | |
Sbjct 99606 TCCAGCTCCTCCTTGTGGCGCATGATGCACTCGTACGTCTCCTTGGAGATCATGGGCGAG 99665
Query 222722 TTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC-GT 222780
|| | || | ||||| |||| ||||||||| | | ||| | || || |
Sbjct 99666 GCCTTGCGGTTGGCAGGGTTGACGTAGTGGTACAGATCCGACACCACCGACGACCACTGC 99725
Query 222781 GTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTC 222840
|| | ||||||||||| || || |||||||| || || | |||| || | |||||
Sbjct 99726 TTCTTG-GTCTGCTTGTGGAGGTTGGACACGGCAATACGGGCAGCCAGAATGGCGTAGTC 99784
Query 222841 AGGGTGCACGGTGGTCATGCTGGCTAGGGTCT 222872
||||| | ||||||| ||| |||||
Sbjct 99785 GGGGTGGGTGACGGTCATGTAGGCAGCGGTCT 99816
Score = 104 bits (114), Expect = 4e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || || | ||||| | | |||||| | ||| ||||| ||||
Sbjct 98084 GTTGACAACCTGGAACTCGCCAGCCAGCACACGGCGCTGGTAAATGTTGGAAGTATACGG 98143
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || ||||||||||||||| ||||| | ||||||||| || ||||| || || |
Sbjct 98144 CTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAG 98203
Query 221236 CAGCAGACTGTTGCGCA 221252
|||||| ||||||||
Sbjct 98204 CAGCAGCGAGTTGCGCA 98220
>seq18
Length=597235
Score = 246 bits (272), Expect = 6e-60
Identities = 575/859 (67%), Gaps = 28/859 (3%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | || |||||| ||||| ||||||||||||
Sbjct 244919 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAGGAGATTGATCTG 244860
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCT-ATC--CAAAGACGAGCAGCATTTTCTCAAG 25593
||||||| | ||| |||| || | || ||| ||||| || | || || |
Sbjct 244859 TCCAAGGATCTCCACGACTGGAACAACCGCATGAACAAGGACGAAAAGTACTTCATCTCG 244800
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|||| | || |||||||| ||||| ||||| || || |||||||| ||| ||| |
Sbjct 244799 CACGTCCTCGCCTTCTTTGCCGCCTCAGATGGCATTGTCAACGAGAACCTGGTTGAGCGC 244740
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
||| | | || || ||| | |||||| || |||||||| |||||||| ||
Sbjct 244739 TTCTCAGGCGAGGTCCAGATCCCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATG 244680
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770
|| || | ||||| ||| ||| | ||| || || |||||||| | || |
Sbjct 244679 GAGAACATCCACTCCGAGACGTACTC---GCTGCTCATCGACACGTACATCAAGGAGCCC 244623
Query 25771 GCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829
||| || | || | ||||| |||||||| ||| ||| ||||| | |||||
Sbjct 244622 GCCCAGCGCAGCTAC-CTGTTCAACGCCATCGACACCATTCCCTGCATCCGCCGCAAGGC 244564
Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888
|||||| | |||||||| | ||| ||| | || |||| | |||| ||||| |
Sbjct 244563 CGACTGGGCCCTCAAGTGGATTGCCGACCACGAGT-CGACCTTTGCCCAGCGCCTGGTGG 244505
Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT-- 25946
||||||| || || ||||||||||| ||| ||| | ||||| |||| ||||||||
Sbjct 244504 CCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCGCCTTTGCCTCCATTTTCTGGCTGC 244445
Query 25947 -CAAGCAGAAGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004
||||| | || | |||||||| ||| ||||||||||||||| || | |||
Sbjct 244444 GCAAGC----GTGGTCTGATGCCCGGCCTGACCTTTTCCAACGAGCTGATTTCGCGCGAC 244389
Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064
||||| || |||| || |||||||||||||||| | || ||| || | || ||
Sbjct 244388 GAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCG---CACCTGAACAAC-CGCCC 244333
Query 26065 TCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCN 26123
|||| || | | | ||||||| || || || | || ||||||||||| |
Sbjct 244332 CAGCAAGAAGCTCATTGAGGAAATCATCACTGATGCCGTCGTCATTGAGAAGGAGTTCCT 244273
Query 26124 NNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACAT 26183
| ||||||||| | ||||||| || |||||
Sbjct 244272 GACTGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACAT 244213
Query 26184 TGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACGC 26242
||||| ||| ||||||| |||||| ||| | || || || | ||||| | |
Sbjct 244212 TGAGTTTGTCGCCGACCGTCTGCTGGTGGC-CCTCGGCAACGAAAAGGTCTACCGCTCCA 244154
Query 26243 CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAA 26302
| ||||| || ||||||||||| ||||| ||| | | || ||||||||||||||||| |
Sbjct 244153 CGAACCCCTTTGACTTTATGGAGAACATCTCGCTCGGTGGCAAGACCAACTTCTTTGAGA 244094
Query 26303 AGAGGGTCGGCGACTATCA 26321
|| | || |||||||| ||
Sbjct 244093 AGCGTGTTGGCGACTACCA 244075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843917597440
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