Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq53 179 4e-40 seq18 107 2e-18 seq7 87.8 2e-12 >seq53 Length=159929 Score = 179 bits (198), Expect = 4e-40 Identities = 895/1402 (64%), Gaps = 45/1402 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGA-AGACATTGATTCTGT 75270 || ||| ||||| | ||||| || || | |||||| || || ||| | ||| || Sbjct 99502 CCCCAGCACATGATTATGCGTGTGGCTGTTGGCATCTGGGGCGACAGAG-TCGATCGCGT 99444 Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328 | | ||||| ||| || ||||| |||| | | ||| || || | || || || Sbjct 99443 CATTGAGACGTACAACCTCATGTCGAGCAAGTTCT--TCACCCATGCCTCGCCCACGCTG 99386 Query 75329 TTCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 75387 ||||| |||||||| || || || ||| |||| ||||||||| ||| || ||||| Sbjct 99385 TTCAACGCTGGTACGCCCCAGGCC-CAGCTGTCGTCTTGCTTCCTGGTCGACATGAAGGA 99327 Query 75388 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 75447 |||||| || | || || || | || || | | ||||| ||||| ||| ||| Sbjct 99326 GGACTCGATTGAGGGCATTTACGATACCCTCAAGACCTGTGCTATGATCTCCAAGATGGC 99267 Query 75448 TGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGG 75505 || ||||| || | | |||| | | |||| |||||| || || Sbjct 99266 GGGTGGTATCGGTCTCAATGTCCACCGCATCCGCGCCACGGG--CTCGTACATTGCCGGC 99209 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || || ||| || | || || ||||| ||||| || || |||||| ||| || ||| Sbjct 99208 ACCAACGGTACCTCCAACGGCATCATTCCCATGCTGCGTGTGTTTAACAACACTGCCCGC 99149 Query 75566 TATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATG 75621 || || | || | | ||| | || || || | || | ||| |||| || || Sbjct 99148 TACGTCGACCAGG-GTGGCAACAAGCGCCCCGGTGCCTTTGCCATTTACCTGGAGCCGTG 99090 Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 ||| |||||| | | ||||||||||| | || ||||| || | ||||||| ||| Sbjct 99089 GCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAGAGGTTCG 99030 Query 75682 GTGTAGAGATCTCTTTTCAT--CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 | ||||| |||| | | |||||||| || ||||| ||||||||||| || ||| Sbjct 99029 CGCCCGTGATCT--TTTCCTGGCTCTGTGGATCCCTGACCTGTTCATGAAGCGTGTCGAG 98972 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 || | | | ||| |||| | || || || || || || || ||||| Sbjct 98971 AAGAACGCTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCCGACTGCTAC 98912 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT 75859 || ||||||||||| || || ||| |||||| || ||||||| | | ||| | Sbjct 98911 GGCGAGGAGTTTGAGGCGCTGTACGAAAAGTACGAGCAGGAGGGCCGCGGTCGTGCCTC- 98853 Query 75860 GTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918 | | || | | || | | ||| | || ||||| | | ||||| |||||||| | || Sbjct 98852 GATCAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAGGCGCAGACCGAGACTGGCAACCC 98793 Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978 | ||||| |||||||| || ||| ||||| ||||| ||||| |||| || || Sbjct 98792 GTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCAT 98733 Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038 | ||||| || || |||||||| ||| | |||||| | ||||||| || || Sbjct 98732 CCGCAGCTCCAACCTGTGCACGGAGATTATCGAGTACTGTGCGCCGGATGAGGTTGCCGT 98673 Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGA 76098 ||||| |||| || | || || || || |||| | | | | | | || Sbjct 98672 GTGCAACCTGGCTTCGCTGGCTCTGCCGTCGTTTGTCGACTACAACAAGAACGAGTACGA 98613 Query 76099 TTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGA 76158 | | || || || || |||| ||| | ||| || || ||||| ||||||| Sbjct 98612 CTTCCAGAAGCTGCACGAGGTCACCAAGGTAGTTGTGCGCAACCTGAACCGCATCATTGA 98553 Query 76159 CAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTAT 76215 | || || ||||| ||| |||| || || ||||| ||| | ||||| Sbjct 98552 CGTCAACCACTACCCCGTGCCCGAG---GCGCAGAACAGCAACATGCGCCACCGCCCTAT 98496 Query 76216 TGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA-----TTT 76270 |||| | ||||| || || || ||||||| || || |||| |||| ||| Sbjct 98495 TGGTGTTGGTGTCCAGGGCCTGGCGGATG-----CCTTCTTGGCGCTTCGCATGCCTTTT 98441 Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330 || || | || || || | || | | |||||||| ||||| || ||||| | Sbjct 98440 GAGTCGGCCGAGGCTCGCAAGCTCAACACGCAAATCTTTGAGACCATCTACCACGCTGCT 98381 Query 76331 CTGGAGGCG-AGTTGTGAATTG-GCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 ||| |||| | || |||| || | || | || | || || | ||||| | Sbjct 98380 CTGACGGCGTCGATGGAGATTGCGCAGGAG--GAGGGAACGTACTCTACGTACGAGGGCT 98323 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAAC 76447 | || | ||||| || | || |||||||| |||| |||| || | || ||| | | Sbjct 98322 CGCCTGTTTCCCAGGGCATTCTGCAGTTTGACATGT-GGAACGTCACGCCCAGCGACCTC 98264 Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507 | ||||||| |||||||| | |||||| || | ||| | || ||| || || Sbjct 98263 TGGGACTGGGCATCGCTCAAGGAGCAGATCAAGCAGCATGGTGTGCGCAACTCGCTGCTG 98204 Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567 | || || ||||| || ||| ||| | || || |||| || || || ||||| || Sbjct 98203 CTTGCGCCGATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTCGAG 98144 Query 76568 CCATACACAACAAACATCTACC 76589 || || || | ||||| |||| Sbjct 98143 CCGTATACTTCCAACATTTACC 98122 >seq18 Length=597235 Score = 107 bits (118), Expect = 2e-18 Identities = 300/455 (66%), Gaps = 14/455 (3%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| ||| ||||||| | || ||||| || ||||| |||||||||||||| | | Sbjct 244525 CCTTTGCCCAGCGCCTGGTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCGCCT 244466 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 | | | |||| ||| || ||||| ||||| ||||| ||||| ||| || || | Sbjct 244465 TTGCCTCCATTTTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCCAACG 244406 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248 | || ||||| || || ||||| || ||| || |||||| ||||||| | Sbjct 244405 AGCTGATTTCGCGCGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCGCACC 244346 Query 65249 TGCGTAATAGACCCACTACCGAAACT-ATCCACGCCATCGTGAAAGAGGCGGTTGAGATT 65307 || || | |||| | ||| || || | | ||| | | || || || | ||| Sbjct 244345 TGAACAACCGCCCCAGCA-AGAAGCTCATTGAGGAAATCATCACTGATGCCGTCGTCATT 244287 Query 65308 GAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAG 65367 ||||| | |||| | || || || || || || |||| |||||| | || Sbjct 244286 GAGAAGGAGTTCCTGACTGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGACCTC 244227 Query 65368 ATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCACC 65426 ||| |||||||||||| ||| | || ||||| || || | | | || | Sbjct 244226 ATGAAGCAGTACATTGAGTTTGTCGCCGACCGTCTGCT------GGTGGCCCTCGGCAAC 244173 Query 65427 CATTTGG---AACG--CGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGG 65481 | || | || | | ||| || |||||||||||||| ||||| || | ||| Sbjct 244172 GAAAAGGTCTACCGCTCCACGAACCCCTTTGACTTTATGGAGAACATCTCGCTCGGTGGC 244113 Query 65482 AAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 ||||||||||||||||||||||| ||||| ||||| Sbjct 244112 AAGACCAACTTCTTTGAGAAGCGTGTTGGCGACTA 244078 >seq7 Length=948245 Score = 87.8 bits (96), Expect = 2e-12 Identities = 184/271 (68%), Gaps = 4/271 (1%) Strand=Plus/Minus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290 ||| ||||| | || |||||| | ||||| | | | || | || ||||||||||| Sbjct 404131 GAGTTTGTGCAGTTCCTCAAGAAGCCCGAAAAGTTTGTTCGGCTAGGCGCCAAGATCCCG 404072 Query 175291 CGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATC 175350 || ||||| | || |||| ||| |||||||| ||||| || || ||| |||| Sbjct 404071 CGTGGCGCGATCCTGTCGGGCCCGCCCGGTACGGGCAAGACGCTGCTGGCCAAGGCCACG 404012 Query 175351 GCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CAAACTTTGTGGAGATGT 175408 || || || || || || ||| | ||| | || || | | | ||||| ||||||| Sbjct 404011 GCTGGCGAGTCGGGCGTGCCGTTC-TTCAGCG-TCAGCGGATCCGAGTTTGTCGAGATGT 403954 Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468 |||| ||||||||| | | || |||||| | |||| | || || | ||| | Sbjct 403953 TTGTGGGTGTGGGTCCGTCGCGTGTGCGCGATTTGTTTGCCACGGCACGTAAGAATGCGC 403894 Query 175469 CATGTATTGTCTTCATTGATGAGATTGATGC 175499 | || || |||| || || ||||||||||| Sbjct 403893 CGTGCATCATCTTTATCGACGAGATTGATGC 403863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569033258880