Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq53 179 4e-40
seq18 107 2e-18
seq7 87.8 2e-12
>seq53
Length=159929
Score = 179 bits (198), Expect = 4e-40
Identities = 895/1402 (64%), Gaps = 45/1402 (3%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGA-AGACATTGATTCTGT 75270
|| ||| ||||| | ||||| || || | |||||| || || ||| | ||| ||
Sbjct 99502 CCCCAGCACATGATTATGCGTGTGGCTGTTGGCATCTGGGGCGACAGAG-TCGATCGCGT 99444
Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328
| | ||||| ||| || ||||| |||| | | ||| || || | || || ||
Sbjct 99443 CATTGAGACGTACAACCTCATGTCGAGCAAGTTCT--TCACCCATGCCTCGCCCACGCTG 99386
Query 75329 TTCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 75387
||||| |||||||| || || || ||| |||| ||||||||| ||| || |||||
Sbjct 99385 TTCAACGCTGGTACGCCCCAGGCC-CAGCTGTCGTCTTGCTTCCTGGTCGACATGAAGGA 99327
Query 75388 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 75447
|||||| || | || || || | || || | | ||||| ||||| ||| |||
Sbjct 99326 GGACTCGATTGAGGGCATTTACGATACCCTCAAGACCTGTGCTATGATCTCCAAGATGGC 99267
Query 75448 TGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGG 75505
|| ||||| || | | |||| | | |||| |||||| || ||
Sbjct 99266 GGGTGGTATCGGTCTCAATGTCCACCGCATCCGCGCCACGGG--CTCGTACATTGCCGGC 99209
Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565
|| || ||| || | || || ||||| ||||| || || |||||| ||| || |||
Sbjct 99208 ACCAACGGTACCTCCAACGGCATCATTCCCATGCTGCGTGTGTTTAACAACACTGCCCGC 99149
Query 75566 TATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATG 75621
|| || | || | | ||| | || || || | || | ||| |||| || ||
Sbjct 99148 TACGTCGACCAGG-GTGGCAACAAGCGCCCCGGTGCCTTTGCCATTTACCTGGAGCCGTG 99090
Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681
||| |||||| | | ||||||||||| | || ||||| || | ||||||| |||
Sbjct 99089 GCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAGAGGTTCG 99030
Query 75682 GTGTAGAGATCTCTTTTCAT--CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739
| ||||| |||| | | |||||||| || ||||| ||||||||||| || |||
Sbjct 99029 CGCCCGTGATCT--TTTCCTGGCTCTGTGGATCCCTGACCTGTTCATGAAGCGTGTCGAG 98972
Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799
|| | | | ||| |||| | || || || || || || || |||||
Sbjct 98971 AAGAACGCTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCCGACTGCTAC 98912
Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT 75859
|| ||||||||||| || || ||| |||||| || ||||||| | | ||| |
Sbjct 98911 GGCGAGGAGTTTGAGGCGCTGTACGAAAAGTACGAGCAGGAGGGCCGCGGTCGTGCCTC- 98853
Query 75860 GTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918
| | || | | || | | ||| | || ||||| | | ||||| |||||||| | ||
Sbjct 98852 GATCAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAGGCGCAGACCGAGACTGGCAACCC 98793
Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978
| ||||| |||||||| || ||| ||||| ||||| ||||| |||| || ||
Sbjct 98792 GTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCAT 98733
Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038
| ||||| || || |||||||| ||| | |||||| | ||||||| || ||
Sbjct 98732 CCGCAGCTCCAACCTGTGCACGGAGATTATCGAGTACTGTGCGCCGGATGAGGTTGCCGT 98673
Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGA 76098
||||| |||| || | || || || || |||| | | | | | | ||
Sbjct 98672 GTGCAACCTGGCTTCGCTGGCTCTGCCGTCGTTTGTCGACTACAACAAGAACGAGTACGA 98613
Query 76099 TTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGA 76158
| | || || || || |||| ||| | ||| || || ||||| |||||||
Sbjct 98612 CTTCCAGAAGCTGCACGAGGTCACCAAGGTAGTTGTGCGCAACCTGAACCGCATCATTGA 98553
Query 76159 CAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTAT 76215
| || || ||||| ||| |||| || || ||||| ||| | |||||
Sbjct 98552 CGTCAACCACTACCCCGTGCCCGAG---GCGCAGAACAGCAACATGCGCCACCGCCCTAT 98496
Query 76216 TGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA-----TTT 76270
|||| | ||||| || || || ||||||| || || |||| |||| |||
Sbjct 98495 TGGTGTTGGTGTCCAGGGCCTGGCGGATG-----CCTTCTTGGCGCTTCGCATGCCTTTT 98441
Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330
|| || | || || || | || | | |||||||| ||||| || ||||| |
Sbjct 98440 GAGTCGGCCGAGGCTCGCAAGCTCAACACGCAAATCTTTGAGACCATCTACCACGCTGCT 98381
Query 76331 CTGGAGGCG-AGTTGTGAATTG-GCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388
||| |||| | || |||| || | || | || | || || | ||||| |
Sbjct 98380 CTGACGGCGTCGATGGAGATTGCGCAGGAG--GAGGGAACGTACTCTACGTACGAGGGCT 98323
Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAAC 76447
| || | ||||| || | || |||||||| |||| |||| || | || ||| | |
Sbjct 98322 CGCCTGTTTCCCAGGGCATTCTGCAGTTTGACATGT-GGAACGTCACGCCCAGCGACCTC 98264
Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507
| ||||||| |||||||| | |||||| || | ||| | || ||| || ||
Sbjct 98263 TGGGACTGGGCATCGCTCAAGGAGCAGATCAAGCAGCATGGTGTGCGCAACTCGCTGCTG 98204
Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567
| || || ||||| || ||| ||| | || || |||| || || || ||||| ||
Sbjct 98203 CTTGCGCCGATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTCGAG 98144
Query 76568 CCATACACAACAAACATCTACC 76589
|| || || | ||||| ||||
Sbjct 98143 CCGTATACTTCCAACATTTACC 98122
>seq18
Length=597235
Score = 107 bits (118), Expect = 2e-18
Identities = 300/455 (66%), Gaps = 14/455 (3%)
Strand=Plus/Minus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
|||| ||| ||||||| | || ||||| || ||||| |||||||||||||| | |
Sbjct 244525 CCTTTGCCCAGCGCCTGGTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCGCCT 244466
Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188
| | | |||| ||| || ||||| ||||| ||||| ||||| ||| || || |
Sbjct 244465 TTGCCTCCATTTTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCCAACG 244406
Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248
| || ||||| || || ||||| || ||| || |||||| ||||||| |
Sbjct 244405 AGCTGATTTCGCGCGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCGCACC 244346
Query 65249 TGCGTAATAGACCCACTACCGAAACT-ATCCACGCCATCGTGAAAGAGGCGGTTGAGATT 65307
|| || | |||| | ||| || || | | ||| | | || || || | |||
Sbjct 244345 TGAACAACCGCCCCAGCA-AGAAGCTCATTGAGGAAATCATCACTGATGCCGTCGTCATT 244287
Query 65308 GAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAG 65367
||||| | |||| | || || || || || || |||| |||||| | ||
Sbjct 244286 GAGAAGGAGTTCCTGACTGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGACCTC 244227
Query 65368 ATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCACC 65426
||| |||||||||||| ||| | || ||||| || || | | | || |
Sbjct 244226 ATGAAGCAGTACATTGAGTTTGTCGCCGACCGTCTGCT------GGTGGCCCTCGGCAAC 244173
Query 65427 CATTTGG---AACG--CGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGG 65481
| || | || | | ||| || |||||||||||||| ||||| || | |||
Sbjct 244172 GAAAAGGTCTACCGCTCCACGAACCCCTTTGACTTTATGGAGAACATCTCGCTCGGTGGC 244113
Query 65482 AAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
||||||||||||||||||||||| ||||| |||||
Sbjct 244112 AAGACCAACTTCTTTGAGAAGCGTGTTGGCGACTA 244078
>seq7
Length=948245
Score = 87.8 bits (96), Expect = 2e-12
Identities = 184/271 (68%), Gaps = 4/271 (1%)
Strand=Plus/Minus
Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290
||| ||||| | || |||||| | ||||| | | | || | || |||||||||||
Sbjct 404131 GAGTTTGTGCAGTTCCTCAAGAAGCCCGAAAAGTTTGTTCGGCTAGGCGCCAAGATCCCG 404072
Query 175291 CGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATC 175350
|| ||||| | || |||| ||| |||||||| ||||| || || ||| ||||
Sbjct 404071 CGTGGCGCGATCCTGTCGGGCCCGCCCGGTACGGGCAAGACGCTGCTGGCCAAGGCCACG 404012
Query 175351 GCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CAAACTTTGTGGAGATGT 175408
|| || || || || || ||| | ||| | || || | | | ||||| |||||||
Sbjct 404011 GCTGGCGAGTCGGGCGTGCCGTTC-TTCAGCG-TCAGCGGATCCGAGTTTGTCGAGATGT 403954
Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468
|||| ||||||||| | | || |||||| | |||| | || || | ||| |
Sbjct 403953 TTGTGGGTGTGGGTCCGTCGCGTGTGCGCGATTTGTTTGCCACGGCACGTAAGAATGCGC 403894
Query 175469 CATGTATTGTCTTCATTGATGAGATTGATGC 175499
| || || |||| || || |||||||||||
Sbjct 403893 CGTGCATCATCTTTATCGACGAGATTGATGC 403863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569033258880
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