Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq9 123 2e-23 >seq9 Length=878609 Score = 123 bits (136), Expect = 2e-23 Identities = 214/311 (69%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| ||||| | || | | |||| ||||||||| ||||| || | | | Sbjct 510331 GTCTCGGGGTTCTTGCACTTCTTGCACAGAACAAACTTGACAATGAAGCCGTAGACGTGA 510390 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | ||| || ||||| ||||| |||| ||| | || |||| | || Sbjct 510391 TCCTGCAGCTTCTTGGTATCGTGCGAGCCATTGATGATCCAGCGGTCGTCGGCGGGGTCA 510450 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | || || || |||||||| | || |||||||| || ||| | | ||||| Sbjct 510451 ATGTTGGTCTGGGCACCCAGCTCAAATCCAAAGTACTTGATCAGGTGAGCACCAGGACGG 510510 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 | |||| || ||||| | | || |||||||| |||||||||||| ||||| ||||| Sbjct 510511 GCCAGCGACTGGGCGACGGCCGACAGGTTGACGACGACAGTCTTGATACCGTTACCCTTG 510570 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620 ||||||| ||||| | ||| ||||| ||||| ||||||||| ||| | | || | Sbjct 510571 CCTTCGATCTTGGTCTGAAGGCGGGGCATCTTGTACCGGTAGAACTGGTCGGTGATATCG 510630 Query 34621 CGGTTAACGTT 34631 |||||||||| Sbjct 510631 GGGTTAACGTT 510641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841217605468