Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 2e-11 >seq5 Length=956377 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| ||| | || ||||| |||||||| | || |||| | | Sbjct 899859 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATTACTCTGGAGGTGGAGTCATCC 899800 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || || |||||| || || || || | || ||| ||| Sbjct 899799 GACACCATTGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAG 899740 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| || || || ||||| ||||||| || | ||||||||||| Sbjct 899739 CAGCGTCTCATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACGCTCTCGGACTACAAC 899680 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||| ||||||||||| | ||| |||| Sbjct 899679 ATTCAGAAGGAGTCTACTCTTCACCTGGT 899651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876430540364