Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq36 95.1 9e-14
>seq36
Length=308131
Score = 95.1 bits (104), Expect = 9e-14
Identities = 159/229 (69%), Gaps = 1/229 (0%)
Strand=Plus/Minus
Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310
||||| |||| | || |||| ||||| || |||||||||| ||| || || ||
Sbjct 257108 CCATCCTCAATGGTCAGCAGAGAGACATCGAAAGTACCACCACCCAGATCGAAGATCAGG 257049
Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370
|| || || || || || |||||||| || |||| ||||||||||| ||
Sbjct 257048 ACGTTGCGCTCGCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCAGCAGTGGGC 256989
Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430
|| || || || | || ||| |||||||| ||||| || || || || ||||| ||
Sbjct 256988 TCGTTGATGATACGCAGAACGTTAAGACCGGCAATAAGACCGGCGTCCTTGGTGGCCTGA 256929
Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA 282479
| || |||||||| || || || || ||||| | ||||| | |||||
Sbjct 256928 CGCTGAGAATCGTTGAAGTAGGCGGGGACAGTGACGACGGCGT-TGTTA 256881
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740626668721176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |