Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq36 95.1 9e-14 >seq36 Length=308131 Score = 95.1 bits (104), Expect = 9e-14 Identities = 159/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 ||||| |||| | || |||| ||||| || |||||||||| ||| || || || Sbjct 257108 CCATCCTCAATGGTCAGCAGAGAGACATCGAAAGTACCACCACCCAGATCGAAGATCAGG 257049 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 || || || || || || |||||||| || |||| ||||||||||| || Sbjct 257048 ACGTTGCGCTCGCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCAGCAGTGGGC 256989 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 || || || || | || ||| |||||||| ||||| || || || || ||||| || Sbjct 256988 TCGTTGATGATACGCAGAACGTTAAGACCGGCAATAAGACCGGCGTCCTTGGTGGCCTGA 256929 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA 282479 | || |||||||| || || || || ||||| | ||||| | ||||| Sbjct 256928 CGCTGAGAATCGTTGAAGTAGGCGGGGACAGTGACGACGGCGT-TGTTA 256881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740626668721176