Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq5 111 1e-19
>seq5
Length=956377
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | |||| || ||||| ||| || || |||||||| || ||
Sbjct 899632 ACCACCACGAAGACGGAGAACCAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCCGA 899691
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| ||||| |||| || | || || ||||| ||||| | ||||||||| || | ||
Sbjct 899692 GAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCCGGAGG 899751
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700
| ||| || ||||| ||| ||| |||| ||| |||| ||||||| ||| ||||
Sbjct 899752 GATACCCTCCTTGTCCTGAATCTTCGACTTCA-CATTGTCAATGGTGTCGGATGACTCCA 899810
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || || || || | || || |||||||||||||||
Sbjct 899811 CCTCCAGAGTAATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCATA 899860
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| | ||||| || ||||| ||| || || |||||||| ||||||
Sbjct 899405 CCACCACGCAGACGCAGAACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 899464
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| |||| |||| || || || ||||| |||| ||||||||| || | ||
Sbjct 899465 AGCGTGCGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGGGGA 899524
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701
| ||| || ||||| ||| || || | | | |||| ||| || || || ||
Sbjct 899525 ATACCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCAATGGTATCCGACGACTCAAC 899583
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | ||| || || || || || | ||| || |||||||||||||||
Sbjct 899584 CTCCAGCGTAATGGTCTTGCCAGTCAGCGTCTTGACAAAGATCTGCATA 899632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703695537920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |