Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 4e-12 >seq5 Length=956377 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || || || || || ||| |||| ||||| || ||| Sbjct 899856 CAGATCTTTGTCAAGACTCTTACCGGCAAGACCATTACTCTGGAGGTGGAGTCATCCGAC 899797 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || || || || || |||||| || Sbjct 899796 ACCATTGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAGCAG 899737 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || |||||||| |||||| | || || || | || | | || |||||| | Sbjct 899736 CGTCTCATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACGCTCTCGGACTACAACATT 899677 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||||||||||||||| ||| | | ||||| Sbjct 899676 CAGAAGGAGTCTACTCTTCACCTGGTTCTCCGTCTTCG 899639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819649201996