Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 1e-16
>seq3
Length=1108403
Score = 102 bits (112), Expect = 1e-16
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 146926 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTA 146985
|| ||||||| | ||| ||||||||||| |||| | |||| | | || |||
Sbjct 700641 TCGACGTGGTCGGCGTACACGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCGGGCACG 700582
Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045
||| ||| | || | || | ||||| |||||||||||||| || |||||||||||
Sbjct 700581 AGGTCGGCCGCGCGCGCGAGCATGTGCGTGAGCAGCGAGTACGACGCAATGTTGAAGGGC 700522
Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086
|| || ||||||||||| | ||| | |||||| ||||||||
Sbjct 700521 ACGCCGAGGCCCATGTCGCACGAGCGCTGGTAGAGCTGGCA 700481
Score = 93.3 bits (102), Expect = 5e-14
Identities = 270/406 (67%), Gaps = 16/406 (4%)
Strand=Plus/Minus
Query 147105 CACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163
|||||||||||| ||| | ||||| ||||||||||||||||| |||||| || |
Sbjct 700366 CACGTAAAACTGCGCAAAC-ATGTGACACGGCGGCAGCGCCATCTTCTTCAGGTCTGCCG 700308
Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223
||||||| || | | | || | | | || | |||| | || | | |
Sbjct 700307 GGTTCCACGCGCTCATGATGATGCGTCGGTCGTACGGCGTGTTCTTCAGCTTGTGCACCA 700248
Query 147224 CCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACCTG 147282
| | ||||||||| ||||||||||| ||||| ||| |||| || || ||| |
Sbjct 700247 CGTCCGCCAGCTGGTCGACGCCCTGGCCTGTGTAGTCGGTCTGCGCA-TCGACATACTCG 700189
Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342
|| || || || | |||||||||||||||||| || ||||||||||| || | ||
Sbjct 700188 GCGCCGAAATGGCGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCC-----CTCGGCGC 700134
Query 147343 GAGAAGCCC--GCC--CGC--TTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCC 147396
| | |||| ||| ||| | ||| || || | ||||||| | ||||||||||
Sbjct 700133 G-GTGGCCCAGGCCGACGCTGTCGAGGTACGCGCGCGACCCGTTGCCGTCCCAGATCTTG 700075
Query 147397 ACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCC 147456
| || || |||| | || |||| |||| |||||||| ||||||||
Sbjct 700074 ATGCCGGCCTCGCTGAGCGGCAGCGACGACGTGCTGCCCTCAATGAACCACAGCAGCTCG 700015
Query 147457 TCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502
| | ||| ||| | || || | ||| || |||||||| ||||
Sbjct 700014 GCAATCACCGCCCGCGTGAACACGCGCTTCGTCGTCAGCAGCGGGA 699969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487445686400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |