Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq18 217 2e-50
seq53 187 4e-41
seq7 118 2e-20
seq60 96.9 5e-14
seq2 86.0 9e-11
>seq18
Length=597235
Score = 217 bits (240), Expect = 2e-50
Identities = 361/512 (71%), Gaps = 22/512 (4%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||||||||| ||||| ||||| ||||||||| | || |
Sbjct 244920 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAGGAGATTGATC 244862
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887
| | || |||| ||||| ||| ||| | | ||||| | |||
Sbjct 244861 TGTCCAAGGATCTCCACG----ACTGGAACAACCGCATGAACAAGGACGAAAAGTACTTC 244806
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| ||||||||||||||| ||| |||||| |||||||| || |||||||||||
Sbjct 244805 ATCTCGCACGTCCTCGCCTTCTTT-GCCGCCTCAGATGGCATTGTCAACGAGAACCTGGT 244747
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
| ||||| |||||||| | || ||||| || | || ||||| ||||||||
Sbjct 244746 TGAGCGCTTCTCAGGCGAGGTCCAGATCCCTGAGGCCCGCTGCTTCTACGGCTTCCAGAT 244687
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||||||||| || || |||||||| || |||||||| ||| |||||||
Sbjct 244686 CATGATGGAGAACATCCACTCCGAGACGTACTCGCTGCTCATCGACACGTACATCAAGGA 244627
Query 1456068 CCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAA 1456127
|| | | || | |||| || |||||||||||| | || | | | ||
Sbjct 244626 GCCCGCCCAGCGCAGCTACCTGTTCAACGCCATCGACACCATTCCCTGCATCCGCCGCAA 244567
Query 1456128 GGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGG 1456184
|||||||||||| | |||||||| | || | ||| ||||| ||||||| ||||
Sbjct 244566 GGCCGACTGGGCCCTCAAGTGGATTGCCGACCACGAG----TCGAC-CTTTGCCCAGCGC 244512
Query 1456185 CTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTT 1456243
|| || | |||||||| ||||||||||||||| ||||| ||| || | |||| ||
Sbjct 244511 CTGGTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCGCCTTTGCCTCCATTTTC 244452
Query 1456244 TGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||| ||||| || || |||||||| ||
Sbjct 244451 TGGCTGCGCAAGCGTGGTCTGATGCCCGGCCT 244420
Score = 131 bits (144), Expect = 2e-24
Identities = 228/325 (70%), Gaps = 10/325 (3%)
Strand=Plus/Minus
Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACG 1456511
||||| ||||||||||| ||||||| | || | | | ||||| | | | | |
Sbjct 244381 TGCACACCGACTTTGCCTGCCTGCTCTTCTCG---CACCTGAACAACCGCCCCAGCAAGA 244325
Query 1456512 TGCCCA---AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGT 1456568
|| || || | |||||| || ||||||| || ||||| ||||| | | |||
Sbjct 244324 AGCTCATTGAGGAAATCATCACTGATGCCGTCGTCATTGAGAAGGAGTTCCTGACTGAGG 244265
Query 1456569 CGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTT 1456628
| ||||| || || |||||||||||||| | |||||| ||||||||||| |||
Sbjct 244264 CCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGAC-CTCATGAAGCAGTACATTGAGTTT 244206
Query 1456629 TGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACC 1456688
||||||||||| ||||| | ||| |||||| || | ||| |||||| | | ||||
Sbjct 244205 -GTCGCCGACCGTCTGCTGGTGGCCCTCGGCAACGAA-AAGGTCTACCGCTCCACGAACC 244148
Query 1456689 CGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG 1456748
| || | |||||| |||||||||| |||||||||||||| || ||| || |
Sbjct 244147 CCTTTGACTTTATGGAGAACATCTCGCTCGGTGGCAAGACCAACTTCTTTGAGAAGCGTG 244088
Query 1456749 -TGGCGAGTACGCCAAGGCCGGCGT 1456772
|||||| ||| |||||||| ||
Sbjct 244087 TTGGCGACTACCAGAAGGCCGGTGT 244063
>seq53
Length=159929
Score = 187 bits (206), Expect = 4e-41
Identities = 344/502 (69%), Gaps = 17/502 (3%)
Strand=Plus/Minus
Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741
|||||||||| || ||| ||||||| ||| ||| ||||| |||| |||||||
Sbjct 99622 CACAAGGAGGAGCTGGACTCTGCCATTGTGTACGACCGTGACTTCAACTACCAGTACTTT 99563
Query 259742 GGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCGG 259801
|| | |||| || || || |||||| || || || | | ||||||||
Sbjct 99562 GGCTTCAAGACCCTGGAGCGCTCGTACCTGTTGAAGCTGGACGGCAAGATTGTCGAGCGT 99503
Query 259802 CCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAAT 259861
|||||| | ||| | |||||||| || ||||| | |||| |||||
Sbjct 99502 CCCCAGCACATGATTATGCGTGTGGCTGTTGGCA--TCTGGGG----------CGACAGA 99455
Query 259862 GCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCAGC 259920
| | || | ||| | | || ||| | ||||||| |||| ||| |||||| ||
Sbjct 99454 G---TCGATCGCGTCATTGAGACGTACAACCTCATGTCG-AGCAAGTTCTTCACCCATGC 99399
Query 259921 GACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTT 259980
|||||||||| || || || || ||||| | | ||| ||||| ||||| ||| |
Sbjct 99398 CTCGCCCACGCTGTTCAACGCTGGTACGCCCCAGGCCCAGCTGTCGTCTTGCTTCCTGGT 99339
Query 259981 GGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCAT 260040
|||||||||| || ||||| |||||||| || || || |||||| || || | ||
Sbjct 99338 CGACATGAAGGAGGACTCGATTGAGGGCATTTACGATACCCTCAAGACCTGTGCTATGAT 99279
Query 260041 CTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTA 260100
||||||| ||| || || |||||| | | ||| | |||||| ||||| | ||
Sbjct 99278 CTCCAAGATGGCGGGTGGTATCGGTCTCAATGTCCACCGCATCCGCGCCACGGGCTCGTA 99219
Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160
| | || ||||||||||| ||||||||| | | |||||||| || || |||||| |
Sbjct 99218 CATTGCCGGCACCAACGGTACCTCCAACGGCATCATTCCCATGCTGCGTGTGTTTAACAA 99159
Query 260161 CACGGCGCGCTACGTCGACCAG 260182
||| || |||||||||||||||
Sbjct 99158 CACTGCCCGCTACGTCGACCAG 99137
Score = 104 bits (114), Expect = 3e-16
Identities = 299/456 (66%), Gaps = 28/456 (6%)
Strand=Plus/Minus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
|| ||| ||||||| || ||||||||| |||||||| |||||||||||||| |
Sbjct 99136 GGTGGCAACAAGCGCCCCGGTGCCTTTGCCATTTACCTGGAGCCGTGGCACGCCGATGTG 99077
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
| | | || ||||| |||||||||||||||| || || |||| ||
Sbjct 99076 TTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAGAGGTTC------GCGCCCGT 99023
Query 261908 GATCTCTTTTACGGC-CTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCG 261966
||||| ||| ||| ||||||| |||||||| ||| || | | || | ||
Sbjct 99022 GATCT-TTTCCTGGCTCTGTGGATCCCTGACCTGTTCATGAAGCGTGTCGAGAA-GAACG 98965
Query 261967 C-GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGG 262025
| |||||| | || | ||||| |||| || |||||| ||| ||||| |||| ||
Sbjct 98964 CTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCCGACTGCTACGGCGAGG 98905
Query 262026 CCTTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGACCGTCGTGCC-C 262084
||||| || || || || ||||| ||||||| |
Sbjct 98904 AGTTTGAGGCGCTGTACGA----AAAGTACGAGCAGGAGGGCCGCGG----TCGTGCCTC 98853
Query 262085 GCACGA----CAGA---TCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCC 262137
| | | |||| | |||| |||||| | | ||| || | |||||| |||| ||
Sbjct 98852 GATCAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAGGCGCAGACCGAGACTGGCAACCC 98793
Query 262138 CTACATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA- 262196
| |||| | ||||||||| | ||||| | ||||||||| |||||||||||||||
Sbjct 98792 GTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCAT 98733
Query 262197 CGACAGAGGCCAACCTGTGCACCGAGATCGTCCAGT 262232
| ||| ||||||||||||| ||||| || |||
Sbjct 98732 CCGCAG-CTCCAACCTGTGCACGGAGATTATCGAGT 98698
Score = 102 bits (112), Expect = 1e-15
Identities = 142/193 (74%), Gaps = 6/193 (3%)
Strand=Plus/Minus
Query 262870 AGCGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGA-CAGCATGGCCTGCGCAA 262928
|||| || ||||||||||| | || || | | | || | |||||||| |||||||
Sbjct 98272 AGCGACCTCTGGGACTGGGCATCGCTCAAGGAG-CAGATCAAGCAGCATGGTGTGCGCAA 98214
Query 262929 CTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGA 262988
|||| |||| | |||| ||||| ||||||| ||||||||||| |||||||||| |||
Sbjct 98213 CTCGCTGCTGCTTGCGCCGATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGA 98154
Query 262989 GGCGTTCGAG--GTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTT 263046
| |||||| || || || |||||| ||| |||||| ||||| | ||||| ||
Sbjct 98153 GTGCTTCGAGCCGT-AT-ACTTCCAACATTTACCAGCGCCGTGTGCTGGCTGGCGAGTTC 98096
Query 263047 ACCGTGGTCAACC 263059
|| |||||||
Sbjct 98095 CAGGTTGTCAACC 98083
>seq7
Length=948245
Score = 118 bits (130), Expect = 2e-20
Identities = 179/250 (72%), Gaps = 6/250 (2%)
Strand=Plus/Minus
Query 332856 CGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACC- 332914
|||| || || ||| || | ||||| |||||||||||| ||| || | |||||| | |
Sbjct 479203 CGTCGGTCAGACGCGCATACCGCAGAATGGCACAACGGGACTGGAGCGGCTCGATAATCT 479144
Query 332915 -ATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGT 332973
|||| ||| |||||| || | ||| || ||||| || |||| | ||||||||||
Sbjct 479143 TATTG--GACTGGTTGCACGCAAAGGCGAAGCGCGTGGTGTTGGAGTAGATTTCCATGGT 479086
Query 332974 CGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGAT 333033
|| |||||||||||||| ||| || | ||||||| ||||||||||| ||||
Sbjct 479085 GCGGCGCAGGGCCTGTTGGGCACCCGAGGTCATCGAGTCGGCTTCGTCGAGGATAATGAG 479026
Query 333034 CTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGT-TTGATGATCTTGC 333092
|||||||| || | || ||| || ||||| ||| ||| ||||| ||||
Sbjct 479025 TTTGTGGCGGCCATTGGGAAGAGTGACTTTTTTCTGGGC-AAATGTCTTGATTCGGTTGC 478967
Query 333093 GCACGACGTC 333102
|||| |||||
Sbjct 478966 GCACAACGTC 478957
>seq60
Length=101284
Score = 96.9 bits (106), Expect = 5e-14
Identities = 154/217 (71%), Gaps = 7/217 (3%)
Strand=Plus/Plus
Query 1600560 CCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGATGGCGTGCG 1600619
|||||||| || ||| |||| ||| || | |||||||||||||||| ||||||
Sbjct 82496 CCTTGCCCGTCAGACACTCAATCAGCTTTCCGACCGTCATGCGCGACGGGAAACCGTGCG 82555
Query 1600620 GGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGTCCTC--GGT 1600677
|||| || | ||||||||| || | | ||| || | | |||| |||||| |||
Sbjct 82556 GGTTCATGATGATGTCGGGCAC--CAGCCCGGCGTCGCTAA-ACGGCAGGTCCTCCTGGT 82612
Query 1600678 GGAGCGCACGCTGCCCACGGTGCCCTTTTGGCCGTGGCGCGACGACAGTTTGTCGCCCAC 1600737
|| | | | ||||| |||||||| |||||||||||||| | |||||| ||||
Sbjct 82613 CGACA--ATGATTCCCACCACACCCTTTTGCCCGTGGCGCGACGAGAATTTGTCACCCAG 82670
Query 1600738 CTCGGGCTGGCGCATGGCCCGCGTGACGATCTTGACC 1600774
||||||| | ||| | |||||| | |||||||
Sbjct 82671 CTCGGGCCGCCGCGTCTGCCGCGTCTGCACCTTGACC 82707
>seq2
Length=1560128
Score = 86.0 bits (94), Expect = 9e-11
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827
||||| || || ||||||||||||||| ||| | ||||||||| ||||||| | |||
Sbjct 1029485 GGCGCTGTTGGCGCGCGCACCACCGAGTCGCAGCTACACCGCGAGCTGGCGTCTGGCCTG 1029544
Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA 165864
|| | ||| | || ||||| ||| ||||||||||||
Sbjct 1029545 TCGTTCCCCGTGGGGTTCAAGAACGGCACCGACGGCA 1029581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177803869660312
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