Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq5 129 6e-25
seq15 102 8e-17
seq27 100 3e-16
seq53 98.7 1e-15
seq18 89.7 5e-13
>seq5
Length=956377
Score = 129 bits (142), Expect = 6e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || || || ||||| |||||||||||||| | ||| || ||| |||
Sbjct 899651 ACCAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGACCGTCCTCG 899710
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || ||||| | ||||||||| || || || || || || || || |||
Sbjct 899711 AGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGA 899770
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || ||| | |||||||| || ||||| || ||||||||||| ||
Sbjct 899771 ATCTTCGACTTCACATTGTCAATGGTGTCGGATGACTCCACCTCCAGAGTAATGGTCTTG 899830
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| | ||| || || || || |||||
Sbjct 899831 CCGGTAAGAGTCTTGACAAAGATCTGCAT 899859
Score = 120 bits (132), Expect = 3e-22
Identities = 143/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| |||||||| || ||||| ||||| || ||||||||||| | ||| |
Sbjct 900155 AGACGCAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGG 900214
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || ||||| ||||| ||||| |||| |||||||||||| || || || || ||
Sbjct 900215 CCGTCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCCGGAGGAATACCCTCC 900274
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || ||||| ||| | |||||||| |||||||| || || ||
Sbjct 900275 TTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGATTCCACCTCAAGGGTG 900334
Query 134676 ATGGTTTTACCGGT 134689
||||| || || ||
Sbjct 900335 ATGGTCTTGCCCGT 900348
Score = 113 bits (124), Expect = 5e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| ||||| || ||||| ||||| || |||||||||||
Sbjct 899861 CCACCACGGAGACGAAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 899920
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || ||||| ||||| ||||| |||| ||||||||||| || ||
Sbjct 899921 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGAGGA 899980
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | || || ||||| || ||
Sbjct 899981 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACT 900040
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
||||| || ||||| || ||||| | || || ||||
Sbjct 900041 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGA 900077
Score = 105 bits (116), Expect = 7e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| || | ||| || || || ||||| || |||||||||||| | ||| ||
Sbjct 899414 AGACGCAGAACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGA 899473
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || ||||| || || ||||| |||| ||||||||| || || || || || ||
Sbjct 899474 CCGTCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGGGGAATACCCTCC 899533
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || ||||| ||| | || || ||||| || || || || |||
Sbjct 899534 TTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCAACCTCCAGCGTA 899593
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || | || || || || || |||||
Sbjct 899594 ATGGTCTTGCCAGTCAGCGTCTTGACAAAGATCTGCAT 899631
>seq15
Length=634592
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || |||||||||||| | ||| | || || ||||| ||||| || || |
Sbjct 108844 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 108785
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| ||||||||||| || || ||||| || || || || || || ||||| ||
Sbjct 108784 TCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 108725
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||| || || || || ||||| ||||| || ||||| || | || || ||||
Sbjct 108724 CGATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGA 108665
Query 134704 AAATTTGCATTTTG 134717
|||| ||||| |||
Sbjct 108664 AAATCTGCATCTTG 108651
>seq27
Length=468876
Score = 100 bits (110), Expect = 3e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| ||||||||||||||| | |||| | || |||||||| ||||| || || |
Sbjct 115674 CCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 115733
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| |||||||| || || || ||||| || || || || || || ||||| ||
Sbjct 115734 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 115793
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||| || || || || || || |||||||| ||||| || | || || ||||
Sbjct 115794 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 115853
Query 134704 AAATTTGC 134711
|| | |||
Sbjct 115854 AACTGTGC 115861
>seq53
Length=159929
Score = 98.7 bits (108), Expect = 1e-15
Identities = 358/557 (64%), Gaps = 5/557 (1%)
Strand=Plus/Minus
Query 7854 CACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCG 7913
||||||||| | ||| ||| | |||||| |||| ||||| || ||| | | ||
Sbjct 99209 CACCAACGGTACCTCCAACGGCATCATTCCCATGCTGCGTGTGTTTAACAACACTGCCCG 99150
Query 7914 ACATGTAGACCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTG 7970
| || |||||||| || || |||| || ||| |||||| || ||||||||||
Sbjct 99149 CTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATTTACCTGGAGCCGTG 99090
Query 7971 GCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAA 8030
|||||| || | | | | || | ||||| ||| || |||||
Sbjct 99089 GCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAGAGGTTCG 99030
Query 8031 AGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTT 8090
|| || ||||| ||| | | ||||| | || || ||||| |||| ||| || |
Sbjct 99029 CGCCCGTGATCTTTTCCTGGCTCTGTGGATCCCTGACCTGTTCATGAAGCGTGTCGAGAA 98970
Query 8091 CGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGG 8150
|||| | ||| | || ||||||||| | |||||| | || |||||
Sbjct 98969 GAACGCTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCCGACTGCTACGG 98910
Query 8151 TTCAAAATTTGAACAATTGTACAAACAATACGAACACGACGGC-GCGTACGTGCGGCAAG 8209
| ||||| ||||| || | ||||| || || ||| ||| ||||| | |
Sbjct 98909 CGAGGAGTTTGAGGCGCTGTACGAAAAGTACGAGCAGGAGGGCCGCGGTCGTGCCTCGA- 98851
Query 8210 TGAAAGCGCGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGT 8269
| || || | | ||| ||||||| | || || | ||| || || | ||||
Sbjct 98850 TCAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAGGCGCAGACCGAGACTGGCAACCCGT 98791
Query 8270 ACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTT 8329
|||||||||||| ||| |||||| ||| ||||| || | ||| ||||||||||
Sbjct 98790 TCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCC 98731
Query 8330 GTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTT 8389
| || ||| |||||| | || ||| | ||||| | ||||| || || || ||||| |
Sbjct 98730 GCAGCTCCAACCTGTGCACGGAGATTATCGAGTACTGTGCGCCGGATGAGGTTGCCGTGT 98671
Query 8390 GCAATCTAGCGTCGGTG 8406
|||| || || ||| ||
Sbjct 98670 GCAACCTGGCTTCGCTG 98654
>seq18
Length=597235
Score = 89.7 bits (98), Expect = 5e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 21718 AGACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGTG 21777
|| || ||||| | |||||||| ||||||||||||||||||| |||||| || ||
Sbjct 244360 AGGCAGGCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTC 244419
Query 21778 AGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACCGGaaaaa 21837
|| |||||||| | ||| || || | | ||||| | |||||| ||||| ||
Sbjct 244420 AGGCCGGGCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCGGAGAAG 244479
Query 21838 aaCACGCCCTCCACAATGGCGAACGCCACCATGCGCCGCGCCAA 21881
|| | |||||| || ||| || ||||||| |||| | || ||
Sbjct 244480 AAGATGCCCTCGACGGCGGCAAAGGCCACCAGGCGCTGGGCAAA 244523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397919871520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |