Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq5 105 6e-18 >seq5 Length=956377 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || ||||| |||||||| | |||| |||| |||||||| || ||| Sbjct 899663 GTAGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGACCGTCCTCGAGCTGCTTGCCG 899722 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| ||||||||||||| || ||||| || | |||||| || || ||||| ||| Sbjct 899723 GCGAAAATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTTCGACTTC 899782 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | || || || ||||| || | ||||| || ||||| Sbjct 899783 ACATTGTCAATGGTGTCGGATGACTCCACCTCCAGAGTAATGGTCTTGCCGGTAAGAGTC 899842 Query 27231 TTCACAAAGATTTGCATA 27248 || |||||||| |||||| Sbjct 899843 TTGACAAAGATCTGCATA 899860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934006404512