Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq53 176 6e-39
seq7 91.5 2e-13
>seq53
Length=159929
Score = 176 bits (194), Expect = 6e-39
Identities = 894/1402 (64%), Gaps = 45/1402 (3%)
Strand=Plus/Plus
Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765
|||| ||||| | || || || || ||||| || || || |||| || || | |||
Sbjct 98122 GGTAAATGTTGGAAGTATACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGC 98181
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
||| || ||||| || || | || || ||| || | ||| | || |||||| | |
Sbjct 98182 TGGCCGTCGGCATCGGCGCAAGCAGCAGCGAGTTGCGCACACCATGCTGCTTGATCTGCT 98241
Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884
||||||| ||||||| || | ||| || | || |||| |||||||||||||
Sbjct 98242 CCTTGAGCGATGCCCAGTCCCAGAGGTCGCTGGGCGTGACGTTCC-ACATGTCAAACTGC 98300
Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC- 110943
|| | || ||||| | || || ||||| | || || | || | || | ||
Sbjct 98301 AGAATGCCCTGGGAAACAGGCGAGCCCTCGTACGTAGAGTACGTTCCCTC--CTCCTGCG 98358
Query 110944 CAATTCACAGCT-CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002
|||| || | |||| ||| | ||||| || ||||| |||||||| | | || |
Sbjct 98359 CAATCTCCATCGACGCCGTCAGAGCAGCGTGGTAGATGGTCTCAAAGATTTGCGTGTTGA 98418
Query 111003 TCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGC 111057
|| || || | || ||||| |||| |||| || || |||||||
Sbjct 98419 GCTTGCGAGCCTCGGCCGACTCAAAAGGCATGCGAAGCGCCAAGAAGG-----CATCCGC 98473
Query 111058 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 111117
|| || || ||||| | ||||||||| | ||| ||||| || || |||| |||
Sbjct 98474 CAGGCCCTGGACACCAACACCAATAGGGCGGTGGCGCATGTTGCTGTTCTGCGC---CTC 98530
Query 111118 A---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT 111174
||||| || || |||||||| ||||| || || ||| | ||| ||
Sbjct 98531 GGGCACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAGGTTGCGCACAACTACCTTGGT 98590
Query 111175 GATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAG 111234
|| || || || || | | || | | | | | | |||| || || ||
Sbjct 98591 GACCTCGTGCAGCTTCTGGAAGTCGTACTCGTTCTTGTTGTAGTCGACAAACGACGGCAG 98650
Query 111235 GGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTC 111294
|| | || |||| ||||| || || ||||||| | |||||| | ||| ||
Sbjct 98651 AGCCAGCGAAGCCAGGTTGCACACGGCAACCTCATCCGGCGCACAGTACTCGATAATCTC 98710
Query 111295 TGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCA 111354
|| || | |||||| || || || |||| ||||| ||||| ||||| ||||||
Sbjct 98711 CGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCA 98770
Query 111355 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTT 111414
|||||||| |||||| | || | || ||||| ||||| | | ||||| || |
Sbjct 98771 GTGGTCCTTGTACAGCATGAACGGGTTGCCAGTCTCGGTCTGCGCCTCCAGAATGGCGTA 98830
Query 111415 CCAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGT 111473
||| | | || | | || | | | ||| | || |||||| |||||||||| ||
Sbjct 98831 CCACAGCTTCTGGGCCTTGATCGA-GGCACGACCGCGGCCCTCCTGCTCGTACTTTTCGT 98889
Query 111474 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 111533
| || || ||||||||||| || ||||| || || || || || || || |
Sbjct 98890 ACAGCGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCACTCGTTGGGGCACA 98949
Query 111534 AAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 111593
|||| ||| | | | | ||| || ||||||||||| ||||| || |||||||| |
Sbjct 98950 TCAGAGTCCAGTCAGCGTTCTTCTCGACACGCTTCATGAACAGGTCAGGGATCCACAGAG 99009
Query 111594 --ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 111651
| |||| ||||| | ||| ||||||| | || ||||| || | |||||
Sbjct 99010 CCAGGAAA--AGATCACGGGCGCGAACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCAAG 99067
Query 111652 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTC 111707
|||||| | | ||| |||||||| ||||| || || | || | | || | |
Sbjct 99068 GAACTCAAACACATCGGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCGGGGCGCTT 99127
Query 111708 GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 111767
| | ||| | || | || ||||| || ||| |||||| || || ||||| ||||| |
Sbjct 99128 GTTG-CCACCCTGGTCGACGTAGCGGGCAGTGTTGTTAAACACACGCAGCATGGGAATGA 99186
Query 111768 TACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCATG 111825
| || | || ||| || || || || |||||| |||| | | ||
Sbjct 99187 TGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTACGAG--CCCGTGGCGCGGATGCGGTG 99244
Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885
|| | | || ||||| || ||| ||| ||||| ||||| | | || || |
Sbjct 99245 GACATTGAGACCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATC 99304
Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945
|| || || | || ||||||||||| || ||| ||||||||| |||| ||| ||
Sbjct 99305 GTAAATGCCCTCAATCGAGTCCTCCTTCATGTCGACCAGGAAGCAAGACGACAGCTG-GG 99363
Query 111946 TCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGA 112002
|| || |||||||| ||||| || || || | || || ||| | | |||| ||
Sbjct 99364 CCTGGGGCGTACCAGCGTTGAACAGCGTGGGCGAGGCATGGGTGA--AGAACTTGCTCGA 99421
Query 112003 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT-TCCCCGTGGATGCCGATTGCGA 112061
||| || ||| ||||| | ||| ||| | ||| || || |||||| | || |
Sbjct 99422 CATGAGGTTGTACGTCTCAATGACGCGATCGA-CTCTGTCGCCCCAGATGCCAACAGCCA 99480
Query 112062 CCCGCATGAACATGTACTGTGG 112083
| ||||| | ||||| ||| ||
Sbjct 99481 CACGCATAATCATGTGCTGGGG 99502
>seq7
Length=948245
Score = 91.5 bits (100), Expect = 2e-13
Identities = 203/301 (67%), Gaps = 4/301 (1%)
Strand=Plus/Plus
Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689
||||||||||| || || |||| || || || ||| | || || | |||| | |
Sbjct 403863 GCATCAATCTCGTCGATAAAGATGATGCACGGCGCATTCTTACGTGCCGTGGCAAACAAA 403922
Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG--CGGCAGAGC 11747
||||| || | | ||||||||| ||||||||||| ||||| | | | || || |
Sbjct 403923 TCGCGCACACGCGACGGACCCACACCCACAAACATCTCGACAAACTCGGATCCGCTGA-C 403981
Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807
||| | ||| || || || || || || |||| ||| || || ||||| ||||
Sbjct 403982 GCTGAA-GAACGGCACGCCCGACTCGCCAGCCGTGGCCTTGGCCAGCAGCGTCTTGCCCG 404040
Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCAAAATATC 11867
|||| ||| |||| || | ||||| || ||||||||||| || | || | |
Sbjct 404041 TACCGGGCGGGCCCGACAGGATCGCGCCACGCGGGATCTTGGCGCCTAGCCGAACAAACT 404100
Query 11868 TCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATCC 11927
| ||||| | |||||| || | ||||| ||| || || | |||||| |||| || |
Sbjct 404101 TTTCGGGCTTCTTGAGGAACTGCACAAACTCCATAATCTCGACCTTGGCCTCGTCCATGC 404160
Query 11928 C 11928
|
Sbjct 404161 C 404161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031403369600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |