Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq53 217 2e-51 seq18 150 2e-31 >seq53 Length=159929 Score = 217 bits (240), Expect = 2e-51 Identities = 1072/1687 (64%), Gaps = 41/1687 (2%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| ||||||||||| ||| |||||||| | | ||||| || Sbjct 97779 CGCAGGTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCCGCAAAGTGCATGCTGGTA 97838 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | ||| || | |||| || ||| | || || || || ||||| Sbjct 97839 ATCTTGCCCATGGTAGGGTCCTTCATGTGGATGTTGAGCGACTGCGACTGGTCAATGAAC 97898 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTC 118013 ||| || || || ||||| | |||| || | || || |||||||| ||| Sbjct 97899 GCTCCGCGGTCGGCAGCCATCTG---CACAACCGTGCGCTGCGAAATCTCCCACACCGTC 97955 Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 |||| || |||| || ||||| ||||| || || ||||| || || | || Sbjct 97956 TTGTACAGCATCTTGATGTCATCGGGGATGCTGGGAATGTTCTGGATCGACCCGTTCTCC 98015 Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 118133 | ||| | | |||||| | | ||||| ||||| | | | || || Sbjct 98016 GCAATGATGCGGTTCTTCATGTTATCCGACCACAGACCCAGGTCCACCAAGTCGCGCAGC 98075 Query 118134 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 118193 || | |||||||| ||||| || || || || | | | || || |||| Sbjct 98076 AGCCACGGGTTGACAACCTGGAACTCGCCAGCCAGCACACGGCGCTGGTAAATGTTGGAA 98135 Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 || || ||||| |||||||| ||||| |||| || || | ||| ||| || ||||| Sbjct 98136 GTATACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATC 98195 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313 || || | || || ||| || | ||| | | | | || | |||||||| | || Sbjct 98196 GGCGCAAGCAGCAGCGAGTTGCGCACACCATGCTGCTTGATCTGCTCCTTGAGCGATGCC 98255 Query 118314 CAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAC 118373 ||||| || | | | | | | |||||| |||||||| || || || ||||| Sbjct 98256 CAGTCCCAGAGGTCGCTGGGCGTGACGTTCCACATGTCAAACTGCAGAATGCCCTGGGAA 98315 Query 118374 GCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCC 118433 | ||||| ||||| | || || | ||||| ||| ||| | || |||| Sbjct 98316 ACAGGCGAGCCCTCGTACGTAGAGTACGTTCCCTCCTCCTGCGCAATCTCCATCGACGCC 98375 Query 118434 TCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA--TTGCCTTGGCCTCGT 118491 || || ||||| || || || ||||| || | | || | |||| |||||| Sbjct 98376 GTCAGAGCAGCGTGGTAGATGGTCTCAAAGATTTGCGTGTTGAGCTTGCGA--GCCTCGG 98433 Query 118492 CGGAATCAAACGCGAGTCG--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 118549 | || ||||| | | || || | || || ||||||| || || |||||||| | Sbjct 98434 CCGACTCAAAAGGCATGCGAAGCGCCAAG--AAGGCATCCGCCAGGCCCTGGACACCAAC 98491 Query 118550 GCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAATT 118606 ||||| ||||| || | ||| || ||| | || ||| |||||| || || Sbjct 98492 ACCAATAGGGCGGTGGCGCATGTTGCTGTTCTGCGC---CTCGGGCACGGGGTAGTGGTT 98548 Query 118607 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 118666 || || | | || || || || ||||| |||| || || ||||| | Sbjct 98549 GACGTCAATGATGCGGTTCAGGTTGCGCACAACTACCTTGGTGACCTCGTGCAGCTTCTG 98608 Query 118667 GTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 118726 | | || | | | | | | |||| || || || || | || ||||| || Sbjct 98609 GAAGTCGTACTCGTTCTTGTTGTAGTCGACAAACGACGGCAGAGCCAGCGAAGCCAGGTT 98668 Query 118727 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACT 118786 ||||| | ||||||| || |||||| ||||| |||||||||| ||| || || Sbjct 98669 GCACACGGCAACCTCATCCGGCGCACAGTACTCGATAATCTCCGTGCACAGGTTGGAGCT 98728 Query 118787 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCAT 118846 |||||||||| |||||| || || ||| ||| || |||||||| ||||| Sbjct 98729 GCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCAT 98788 Query 118847 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTG 118905 | | || | || ||||| || || | || ||||| || | ||| | | || | || Sbjct 98789 GAACGGGTTGCCAGTCTCGGTCTGCGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTT 98848 Query 118906 GCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTT 118965 | | | ||| | || ||||| | |||||||||| ||| || || |||||||| | Sbjct 98849 GATC-GAGGCACGACCGCGGCCCTCCTGCTCGTACTTTTCGTACAGCGCCTCAAACTCCT 98907 Query 118966 CACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCAC 119025 | || | || | || || || || | ||||| | |||| ||| | | | Sbjct 98908 CGCCGTAGCAGTCGGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCAGCGT 98967 Query 119026 CCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGAC 119085 || ||| || ||||||||||| ||||| |||||||| || ||| ||| ||||| || Sbjct 98968 TCTTCTCGACACGCTTCATGAACAGGTCAGGGATCCACAGAGCCAGGAAAAGATCACGGG 99027 Query 119086 AGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGT 119145 |||| | ||||| | || || || |||| || | || || | | ||| |||| Sbjct 99028 CGCGAACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGT 99087 Query 119146 GCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTACGACGACCAGCCTGGTTTA 119199 ||||||| |||||||| | || | | || | ||| | | ||| |||||| | Sbjct 99088 GCCACGGCTCCAGGTAAATGGCAAAGGCACCGGGGCGCTT--GTTG-CCACCCTGGTCGA 99144 Query 119200 CATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCAT 119259 | || | |||||| |||||| ||||| ||||| |||||||| || | ||| || | Sbjct 99145 CGTAGCGGGCAGTGTTGTTAAACACACGCAGCATGGGAATGATGCCGTTGGAGGTACCGT 99204 Query 119260 TTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACC 119317 | || || || |||||| | |||| | || ||||| | | ||| ||||| Sbjct 99205 TGGTGCCGGCAATGTACGAGCC--CGTGGCGCGGATGCGGTGGACATTGAGACCGATACC 99262 Query 119318 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 119377 || ||| ||| ||||| || || | |||| | |||| || || || ||||| Sbjct 99263 ACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATCGTAAATGCCCTCAATCGA 99322 Query 119378 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCT-GGGTGTACCAGCGT 119436 ||| |||| | ||| |||||||| ||||| || ||||| ||| |||||||||| Sbjct 99323 GTCCTCCTTCATGTCGACCAGGAAGCAAGACGACAGCTG-GGCCTGGGGCGTACCAGCGT 99381 Query 119437 TGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTC 119494 |||| || || || | || ||| ||| | | |||| ||||| || ||| ||||| Sbjct 99382 TGAACAGCGTGGGCGAGGCATGGGTGA--AGAACTTGCTCGACATGAGGTTGTACGTCTC 99439 Query 119495 CAAGACG 119501 | |||| Sbjct 99440 AATGACG 99446 >seq18 Length=597235 Score = 150 bits (166), Expect = 2e-31 Identities = 528/815 (65%), Gaps = 21/815 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786 ||||| ||||| |||||||| |||||||| ||||| || || ||| ||| |||||||| Sbjct 244078 TAGTCGCCAACACGCTTCTCAAAGAAGTTGGTCTTGCCA-CCGAGCGAGATGTTCTCCAT 244136 Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAG 129840 ||| ||||| |||||| | ||| | | | | || | | | | | || Sbjct 244137 AAAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTTTCGTTGCCGAGGGCCACC------AG 244190 Query 129841 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAG 129900 ||||| || | ||| |||||||||||| ||| |||| |||||| |||| || Sbjct 244191 CAGACGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAG 244250 Query 129901 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGAT 129960 | || || || || || | |||| ||||||||||| | || || || | ||| Sbjct 244251 GGCGCAGGGCAGGGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCATCAGTGATGAT 244310 Query 129961 GGCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAA 130020 | | |||| || | ||| || | ||| || | |||||| |||||| Sbjct 244311 TTCCTCAATGAGCTTCTTGCTGGGGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAGGCAAA 244370 Query 130021 CTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 130080 || ||| || |||||||| || || || || || || || ||| ||| || ||||| Sbjct 244371 GTCGGTGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCAT 244430 Query 130081 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 130140 ||||| ||||| || ||||||||| | ||| | ||| ||||||||||| ||||| Sbjct 244431 CAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCGGAGAAGAAGATGCCCTC 244490 Query 130141 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACT 130199 || || || || | || |||| ||||||| || | | || ||| ||||| Sbjct 244491 GACGGCGGCAAAGGCCACCAGGCGCTGGGCAAAGG-TCGACTCGTGGTCGGCAATCCACT 244549 Query 130200 TCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTT 130259 | | ||||| | ||||| ||| || || | ||| | ||| || | || || | Sbjct 244550 TGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTGAACAGGT 244609 Query 130260 CCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCAT 130319 | | | || || ||||||||| | || ||||| || || || ||| | Sbjct 244610 AGCTGCGCTGGGCGGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTCTCGGAGT 244669 Query 130320 GGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACC 130378 ||| | | ||| || | ||| | ||||||| |||| || || ||||| ||| Sbjct 244670 GGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGGATCTGGACC 244728 Query 130379 TCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 130438 || ||| || | | | ||||| ||||| ||||| || | ||||| || Sbjct 244729 TCGCCTGAGAAGCGCTCAACCAGGTTCTCGTTGACAATGCCATCTGAGGCGGCAAAGAAG 244788 Query 130439 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 130495 || |||| | | ||||| | || ||| | || ||||| || | |||||||||| Sbjct 244789 GCGAGGACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGG 244848 Query 130496 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||||| || ||||| | |||||| || ||||| Sbjct 244849 AGATCCTTGGACAGATCAATCTCCTCGGCCGTCCA 244883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434612486560