Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq53 304 1e-77
seq18 136 4e-27
seq41 122 1e-22
>seq53
Length=159929
Score = 304 bits (336), Expect = 1e-77
Identities = 508/725 (70%), Gaps = 16/725 (2%)
Strand=Plus/Minus
Query 53234 CGTGTCCGTGAGACGTACGACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCA 53290
|| ||| |||||||||| || | ||| ||| |||| ||| || || ||| ||||
Sbjct 99448 CGCGTCATTGAGACGTACAACCTCATGTCGAGC---AAGTTCTTCACCCATGCCTCGCCC 99392
Query 53291 ACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATG 53350
|| |||||||||||||||||| || | ||| ||||| ||||||||||| | |||
Sbjct 99391 ACGCTGTTCAACGCTGGTACGCCCCAGGCCCAGCTGTCGTCTTGCTTCCTGGTCGACATG 99332
Query 53351 AAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAG 53410
||||| |||||||| || ||||| ||||| || |||||| ||||| |||||||||
Sbjct 99331 AAGGAGGACTCGATTGAGGGCATTTACGATACCCTCAAGACCTGTGCTATGATCTCCAAG 99272
Query 53411 TGGTCGGGTGGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCA 53468
| |||||||||||||| || | || || | || |||| || | ||| | ||
Sbjct 99271 ATGGCGGGTGGTATCGGTCTCAA-TG-TCCACCGCATCCGCGCCACGGGCTCGTACATTG 99214
Query 53469 AGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGG 53528
|| || ||||| | || | || ||| | || ||||| || || || |||||||| |
Sbjct 99213 CCGGCACCAACGGTACCTCCAACGGCATCATTCCCATGCTGCGTGTGTTTAACAACACTG 99154
Query 53529 CCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGC 53588
|||| |||||| |||||||||| |||||| || | || ||||| ||||| ||||
Sbjct 99153 CCCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATTTACCTGGAGC 99094
Query 53589 CGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGA 53648
||||||||||||| | | ||||| || || ||||| ||| || || | ||||||
Sbjct 99093 CGTGGCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAGAGG 99034
Query 53649 TGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGG 53708
| ||| |||||| || || ||||||||||| || ||||| |||||| | || |
Sbjct 99033 TTCGCGCCCGTGATCTTTTCCTGGCTCTGTGGATCCCTGACCTGTTCATGAAGCGTGTCG 98974
Query 53709 AGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGTC 53767
||||| ||| || ||| ||||||||||| ||||||||||| ||||| | | || |
Sbjct 98973 AGAAGAACGCTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCCGACTG-C 98915
Query 53768 TACGGTGAGGAGTTTAACGAGATGTATCGGACGTAC--GCAGTTCAGGGCCGCTACAAGA 53825
||||| ||||||||| | | | |||| | |||| |||| ||||||||
Sbjct 98914 TACGGCGAGGAGTTTGAGGCGCTGTACGAAAAGTACGAGCAG--GAGGGCCGCGGTCGTG 98857
Query 53826 AGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAA 53885
| ||||||| | || | ||| | || || || || ||| ||||| || |
Sbjct 98856 CCTCGATCAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAGGCGCAGACCGAGACTGGCA 98797
Query 53886 CGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCG 53945
|||| |||| |||||||| |||| |||||||||||||||||| | |||
Sbjct 98796 ACCCGTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCA 98737
Query 53946 TCATC 53950
||||
Sbjct 98736 CCATC 98732
Score = 114 bits (126), Expect = 1e-20
Identities = 296/446 (66%), Gaps = 9/446 (2%)
Strand=Plus/Minus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| ||||| | ||||| ||||| || || ||| | ||||| ||||||||
Sbjct 98218 CGCAACTCGCTGCTGCTTGCGCCGATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAAC 98159
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| ||||||||||| || ||||||| |||| |||||| || || || |||
Sbjct 98158 AACGAGTGCTTCGAGCCGTATACTTCCAACATTTACCAGCGCCGTGTGCTGGCTGGCGAG 98099
Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663
|| | ||||| | || | ||| || | | | ||||
Sbjct 98098 TTCCAGGTTGTCAACCCGTGGCTGCTGCGCGACTTGGTGGACCTGGGTCTGTGGTCGGAT 98039
Query 55664 CAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGG--AGATTC 55718
| || |||| || || |||| | ||||||| || ||||||| | || ||
Sbjct 98038 AACATGAAGAACCGCATCATTGCGGAGAACGGG---TCGATCCAGAACATTCCCAGCATC 97982
Query 55719 CTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATT 55777
| | | | ||||| | | ||| |||||||||||||||| | ||| | | |
Sbjct 97981 CCCGATGACATCAAGATGCTGTACAAGACGGTGTGGGAGATTTCGCAGCGCACGGTTGTG 97922
Query 55778 GACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG 55837
| ||| ||| || || || |||| ||| |||||||| ||||| || |||||| ||||
Sbjct 97921 CAGATGGCTGCCGACCGCGGAGCGTTCATTGACCAGTCGCAGTCGCTCAACATCCACATG 97862
Query 55838 GAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTC 55897
|| | ||| | ||| |||| | | | ||||||||| || |||||| ||| |||
Sbjct 97861 AAGGACCCTACCATGGGCAAGATTACCAGCATGCACTTTGCGGGCTGGAAGCTGGGTCTC 97802
Query 55898 AAGACGGGTATGTACTATCTGCGGAC 55923
|||||||| |||||||| ||||| ||
Sbjct 97801 AAGACGGGCATGTACTACCTGCGTAC 97776
>seq18
Length=597235
Score = 136 bits (150), Expect = 4e-27
Identities = 550/846 (65%), Gaps = 34/846 (4%)
Strand=Plus/Plus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| || || || ||||| ||||| ||||||||||| || | | |||||||||||||||
Sbjct 244078 TAGTCGCCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGCGAGATGTTCTCCATA 244137
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCC---CCAAACTGTGCCATGAGG 74579
|||| || |||||| | | | ||| | ||| || || | ||| ||
Sbjct 244138 AAGTCAAAGGGGTTCGTGGAGCGGTAGAC---CTTTTCGTTGCCGAGGGCCACCAGCAGA 244194
Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639
|| || || ||||| | |||||||||| |||| | || | |||||||| || |
Sbjct 244195 CGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGCG 244254
Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCC-CATTGGACAATCTT 74698
|| ||||| ||||| || | ||||| |||| | || || || || | || |
Sbjct 244255 CAGGGCAGGGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCATCAGTG-ATGATTTC 244313
Query 74699 GTGAATGT-CTT--TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAA 74754
| |||| ||| || |||| || | ||||||| ||| | ||| | || |||||
Sbjct 244314 CTCAATGAGCTTCTTGCTGGGGCGGTTGT---TCAGGTGCGAGAAGAGCAGGCA-GGCAA 244369
Query 74755 ACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCA 74814
| || ||| ||| || || | |||| || || ||||| | ||||| ||||
Sbjct 244370 AGTCGGTGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCA 244429
Query 74815 TAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTT 74874
| || |||||||| || ||| || |||| |||| || |||||||||||| |
Sbjct 244430 TCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCGGAGAAGAAGATGCCCT 244489
Query 74875 CGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATC--GGAAGTC-ATCCAAG 74931
|||| |||||||| || ||||| || || || | | || || | | |||||
Sbjct 244490 CGACGGCGGCAAAGGCCACCAGGCGCTGGGCAAAGGTCGACTCGTGGTCGGCAATCCACT 244549
Query 74932 TCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATCGCTTGGAAGAGG 74990
| | ||||| || || || || || |||||| | || ||||| || | ||| |||
Sbjct 244550 TGAGGGCCCAGTCGGCCTTGCGGCGGA-TGCAGGGAATGGTGTCGATGGCGTTGAACAGG 244608
Query 74991 CTTGCCTTCTCT--TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCG 75048
| || | || |||| ||||||| | | |||| || | || ||||||||||| |
Sbjct 244609 --TAGCTGCGCTGGGCGGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTCTCGG 244666
Query 75049 AATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTA 75108
| || || ||| | | |||| | ||||||| | || ||||| | ||||| |
Sbjct 244667 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGGATCTGGA 244726
Query 75109 CATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAA 75168
| || ||| || | | | ||||| |||| ||||| || |||||||| || |
Sbjct 244727 CCTCGCCTGAGAAGCGCTCAACCAGGTTCTCGTTGACAATGCCATCTGAGGCGGCAAAGA 244786
Query 75169 AAGCCAGTACCATTTTGATAAAGTGGCGCTCATC---GTCAGTGAGTTTGTCCCAATCCT 75225
| || || || ||| |||| || || || || | |||| ||| || |
Sbjct 244787 AGGCGAGGACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGT 244846
Query 75226 TCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA--ACTCCCAATC-GCCTTTT 75282
|| ||| | || ||||||||||||| |||||||||| || || || ||||| |
Sbjct 244847 GGAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAGGACGCC---TCGGCCTTCT 244903
Query 75283 TGTACA 75288
||||||
Sbjct 244904 TGTACA 244909
>seq41
Length=234129
Score = 122 bits (134), Expect = 1e-22
Identities = 193/275 (70%), Gaps = 4/275 (1%)
Strand=Plus/Minus
Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358
||||| ||| ||| ||||||| ||||||||| |||||||| ||||| | ||
Sbjct 152777 AGGCGTGTGTGAATATAACGAGCCGAGGCAGCATCCGAACCACCAGCCAGACGAGATCCA 152718
Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418
|| | ||||| ||||||| | ||| | |||||||| ||| |||||||| || ||||
Sbjct 152717 AAGTTACCACTGGGCTCCAGGCAGTTGACGTTGTTGGAGCCTACAAAGTTCTGCGCCAGA 152658
Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478
| || || || || ||||||||| || || || ||||| | | | |||
Sbjct 152657 CCAATGATGGTCTGCTGCAGCGACGCCTCACCGTGCTGGTAGGCCGTGCGACCGGACACA 152598
Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536
|| || || |||| | |||||||||| || |||| | || || ||| |||||| |
Sbjct 152597 TAACCAGCAAGCTCAACCACCTTCATATCCTTGACAATA--TTGCTCATGAAGCAGGCGT 152540
Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCC 117571
| || ||||||||||||| ||||| | ||| |||
Sbjct 152539 AGATAACCTTGCGCTGACCGGGCTTGAAACCGTCC 152505
Score = 105 bits (116), Expect = 7e-18
Identities = 172/248 (69%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 152049 GGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTT 152108
||| |||||| ||||| ||||| || | |||||| | ||| |||||| ||| |||
Sbjct 152751 GGCAGCATCCGAACCACCAGCCAGACGAGATCCAAAGTTACCACTGGGCTCCAGGCAGTT 152692
Query 152109 GAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGC 152168
|| |||||||| ||| || || ||||| |||| | | || || |||||| |||
Sbjct 152691 GACGTTGTTGGAGCCTACAAAGTTCTGCGCCAGACCAATGATGGTCTGCTGCAGCGACGC 152632
Query 152169 TTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCAT 152228
|||||||| || || ||||| | | | | || || || | || ||||||||||
Sbjct 152631 CTCACCGTGCTGGTAGGCCGTGCGACCGGACACATAACCAGCAAGCTCAACCACCTTCAT 152572
Query 152229 GTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAA 152288
||| | | || || ||| |||||||| || ||||||||||| || || ||
Sbjct 152571 ATCCTTGACAATATTGCTCATGAAGCAGGCGTAGATAACCTTGCGCTGACCGGGCTTGAA 152512
Query 152289 ACCGTCCA 152296
||||||||
Sbjct 152511 ACCGTCCA 152504
Score = 93.3 bits (102), Expect = 5e-14
Identities = 254/379 (67%), Gaps = 10/379 (3%)
Strand=Plus/Minus
Query 152736 CTCGATCAGCTTCGGCCAGTACACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGA 152795
|| || |||| ||| | | ||| || || | ||||| | | ||||||||||| ||
Sbjct 152058 CTTGAGCAGCGACGGAAACTGCACCTGCAAGAAGTTGATCAAAAGACCCTTGATGTGAGA 151999
Query 152796 TCCGTCAAGATCCGCGTCGGTCATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGA 152855
|| ||| ||||| || | ||| ||||| ||| |||||||||| | | | | | |||
Sbjct 151998 ACCATCATGATCCTGATCAGCCATAATCATTAGATGACCGTAGCGGA-GACTCTTGGTGT 151940
Query 152856 CC-CGTAGAC--CTTTCCATGTTGAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTC 152912
|| |||||| | || || | || || || | || |||| || || ||||
Sbjct 151939 CCGTGTAGACGGCCTT--GTGCTTGAGACCCAGAAACTGCTTGATATTTTGAATCTCCTG 151882
Query 152913 ATTATCGGTCACCTGTTTCACCGTGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGG 152972
|| | ||| | ||| | | || ||||| || || ||| || ||| || || || ||
Sbjct 151881 GTTCTTGGTGATCTGATCAAGCGACGCATCACGCACGTTGAGCATCTTACCACGCAGGGG 151822
Query 152973 AAACACGCCGAACGCGTTGC-GGCCTACAA-CGCTCAGACCGGCAATAGCAAGGGCTTTC 153030
|||||| || || ||| | | || | | || || | ||||||| | ||| | ||
Sbjct 151821 AAACACTCC-AATGCGGTCCGGGTCAAGAATAGCAC-GACCGGCCACAGCCAAACTCTTG 151764
Query 153031 GCCGAGTCACCCTCGGTGATAATAAGCGTACAGTCGTGAGACCGATGAGTACCGGCCCAG 153090
|| ||||||||||| || | ||| ||||| || ||||| | | ||||| ||| ||
Sbjct 151763 GCTGAGTCACCCTCCGTCAGAATTAGCGTGCACTCGTGGCCGTGGCGCGTACCAGCCAAG 151704
Query 153091 TTGGCGTCGTCAAGCTTGG 153109
||||| ||| | |||||||
Sbjct 151703 TTGGCATCGACCAGCTTGG 151685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215480144800
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