Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq3 98.7 8e-16
>seq3
Length=1108403
Score = 98.7 bits (108), Expect = 8e-16
Identities = 199/294 (68%), Gaps = 6/294 (2%)
Strand=Plus/Minus
Query 30061 CACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30117
|||||||||||| | |||| ||| ||||| || || ||||| || ||||
Sbjct 700366 CACGTAAAACTGCGCAAACAT---GTGACACGGCGGCAGCGCCATCTTCTTCAGGTCTGC 700310
Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30177
|||||||| |||| || ||||||||| | ||| | || ||||| | | || |||
Sbjct 700309 CGGGTTCCACGCGCTCATGATGATGCGTCGGTCGTACGGCGTGTTCTTCAGCTTGTGCAC 700250
Query 30178 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30237
||| |||||| || || ||| || | |||||| | | | || |||||
Sbjct 700249 CACGTCCGCCAGCTGGTCGACGCCCTGGCCTGTGTAGTCGGTCTGCGCATCGACATACTC 700190
Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30297
|| |||||||| | ||||||||| |||||||| || |||||||| ||||| | | |||
Sbjct 700189 GGCGCCGAAATGGCGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCCTCGGCGCGGTG 700130
Query 30298 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30351
| | ||| |||| | | | | || |||||| |||||||||||||
Sbjct 700129 GCCCAGGCCGACGCTGTCGAGGTACGCGCGCGACCCGTTGCCGTCCCAGATCTT 700076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310023654992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |