Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq3 105 6e-18
>seq3
Length=1108403
Score = 105 bits (116), Expect = 6e-18
Identities = 259/381 (68%), Gaps = 10/381 (3%)
Strand=Plus/Plus
Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282
||||||||||||||||| || |||| | | || ||| | | |||||||||||||||
Sbjct 699971 CCGCTGCTGACGACGAAGCGCGTGTTCACGCGGGCGGTGATTGCCGAGCTGCTGTGGTTC 700030
Query 34283 GT-GAGGGGGGCCACGAACACCAAGGAGCTCT-CGTCCCGGGGGGTGAAGATCTGGGACG 34340
| ||||| || ||| | | |||| || | || | |||||||||||||
Sbjct 700031 ATTGAGGGCAGC-ACGTCGTCGCTGCCGCTCAGCGAGGCCGGCA-TCAAGATCTGGGACG 700088
Query 34341 CTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG--TTCCCATCTCGGGAGGAGGGCGA 34398
||||||| || | | || |||| ||| || | | | || | ||||||||
Sbjct 700089 GCAACGGGTCGCGCGCGTACCTCGACA-GCGTCGGCCTGGGCCAC-CGCGCCGAGGGCGA 700146
Query 34399 CTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGA 34458
| ||||||| || ||||| ||||||||| | || || || || |||||| | | |||
Sbjct 700147 CCTGGGCCCCGTGTACGGCTTCCAGTGGCGCCATTTCGGCGCCGAGTAT-GTCGATGCGC 700205
Query 34459 AG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGC 34517
|| | ||||| | || ||||| | ||||||||| | ||||| | ||| |||||
Sbjct 700206 AGACCGACTACACAGGCCAGGGCGTCGACCAGCTGGCGGACGTGGTGCACAAGCTGAAGA 700265
Query 34518 GGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGA 34577
| || | ||| || | ||| | ||| |||||||||||||| || || ||
Sbjct 700266 ACACGCCGTACGACCGACGCATCATCATGAGCGCGTGGAACCCGGCAGACCTGAAGAAGA 700325
Query 34578 TGGCGCTCCCCCCGTGCCACA 34598
||||||| || ||||| ||||
Sbjct 700326 TGGCGCTGCCGCCGTGTCACA 700346
Score = 105 bits (116), Expect = 6e-18
Identities = 259/381 (68%), Gaps = 10/381 (3%)
Strand=Plus/Minus
Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806
|||| ||||| || ||||||||| || || |||||||||||||| ||| | ||
Sbjct 700346 TGTGACACGGCGGCAGCGCCATCTTCTTCAGGTCTGCCGGGTTCCACGCGCTCATGATGA 700287
Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTC 6866
| | || ||| | || | ||||| ||| | ||||| | ||||||||| | |
Sbjct 700286 TGCGTCGGTCGTACGGCGTGTTCTTCAGCTTGTGCACCACGTCCGCCAGCTGGTCGACGC 700227
Query 6867 CCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGG 6925
|||| || | ||||| | || ||| | | |||||| || || || || | |||||||
Sbjct 700226 CCTGGCCTGTGTAGTCGGTCTGCGCATCGAC-ATACTCGGCGCCGAAATGGCGCCACTGG 700168
Query 6926 AACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAA--CCCCCGCTTGTCCA 6983
|| ||||| || ||||||| ||||||||| | || | | | || ||| |||| |
Sbjct 700167 AAGCCGTACACGGGGCCCAGGTCGCCCTCGGCGCG-GTGGCCCAGGCCGACGC-TGTCGA 700110
Query 6984 GAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACG-AGAGCTCCTTG 7042
| | | || ||||||| ||||||||||||| | || | || |||| |
Sbjct 700109 GGTACGCGCGCGACCCGTTGCCGTCCCAGATCTTGA-TGCCGGCCTCGCTGAGCGGCAGC 700051
Query 7043 GTGTTCGTGGCCCCCCTC-ACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACAC 7101
| ||| || ||||| | ||||||||||||||| | | ||| || | | ||||
Sbjct 700050 GACGACGT-GCTGCCCTCAATGAACCACAGCAGCTCGGCAATCACCGCCCGCGTGAACAC 699992
Query 7102 ACGTTTCGTCGTCAGCAGCGG 7122
|| |||||||||||||||||
Sbjct 699991 GCGCTTCGTCGTCAGCAGCGG 699971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448261974150720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |