Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq5 82.4 5e-11 >seq5 Length=956377 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| |||| || ||||| || | || ||||| || || || |||| Sbjct 899538 GACAAGGAGGGTATTCCCCCTGACCAGCAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAG 899479 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| |||| | ||||| ||||||||||| || ||| ||| |||| |||||| || Sbjct 899478 GACGGTCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGACTCTGCACTTGGTTCTG 899419 Query 28003 CGTTTGCGTGGCGGC 28017 ||| ||||||| ||| Sbjct 899418 CGTCTGCGTGGTGGC 899404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862070382452