Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 3e-15 >seq5 Length=956377 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || ||| || || || || || |||| || || || |||| || Sbjct 899423 ACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCC 899482 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || ||||| || |||||||||||||| | ||| | | ||| |||||| Sbjct 899483 AGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGA 899542 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || |||| ||| | | | ||||| |||||| || |||| ||| || | || Sbjct 899543 ATCTTGGACTTGA-CGTTGTCAATGGTATCCGACGACTCAACCTCCAGCGTAATGGTCTT 899601 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||||||| || |||||||| ||||| Sbjct 899602 GCCAGTCAGCGTCTTGACAAAGATCTGCAT 899631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545202133388