Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq3 86.0 5e-12
>seq3
Length=1108403
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 29612 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAG 29671
||||||| | ||||| | || | ||| | | ||||| || |||||||| |||
Sbjct 700683 GGAAAGGCGCGCGGCTCGCGCTGCACCTGCACCTGCAGCGCGTCGACGTGGTCGGCGTAC 700624
Query 29672 ACGTGAGCATCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29730
||||| || || |||| | ||| | || || || || | || ||| || | ||
Sbjct 700623 ACGTGCGCGTCGCCCATGACGTGCGTCAGGCTG-CCGGGCACGAGGTCGGCCGCGCGCGC 700565
Query 29731 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTC 29790
| ||||| |||||| || ||||| || ||||| |||||||| ||||| ||||||||
Sbjct 700564 GAGCATGTGCGTGAGCAGCGAGTACGACGCAATGTTGAAGGGCACGCCGAGGCCCATGTC 700505
Query 29791 CCCTGACCTCTGGTAGAGCTGGCA 29814
| || | |||||||||||||||
Sbjct 700504 GCACGAGCGCTGGTAGAGCTGGCA 700481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406162823791336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |