Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq5 143 2e-29
seq15 134 1e-26
>seq5
Length=956377
Score = 143 bits (158), Expect = 2e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||||||||| || |||||| || |||||||| || | ||| ||| |||| ||
Sbjct 899651 ACCAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGACCGTCCTCG 899710
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| || || | ||||||||| || | ||| | ||| ||||| |||
Sbjct 899711 AGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGA 899770
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||||| | | |||||||||| || |||||||||| ||||| |||||
Sbjct 899771 ATCTTCGACTTCACATTGTCAATGGTGTCGGATGACTCCACCTCCAGAGTAATGGTCTTG 899830
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || ||||| || ||||| |||||
Sbjct 899831 CCGGTAAGAGTCTTGACAAAGATCTGCAT 899859
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || |||| ||| || || |||||| ||||||||||| |||| |
Sbjct 899405 CCACCACGCAGACGCAGAACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 899464
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| |||| ||||||||||| || |||||||||| ||||||||| || | ||
Sbjct 899465 AGCGTGCGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGGGGA 899524
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| ||| ||||| ||| ||||| ||| | | | ||||| || | || || |||
Sbjct 899525 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCAACC 899584
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| |||||| ||||| || || || ||||| || ||||| |||||
Sbjct 899585 TCCAGCGTAATGGTCTTGCCAGTCAGCGTCTTGACAAAGATCTGCAT 899631
Score = 122 bits (134), Expect = 6e-23
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | || || ||||| || ||| |||||| ||||||||||| ||
Sbjct 900142 CATACCACCACGCAGACGCAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 900201
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| |||| || |||||||| || |||||||||| |||||||||||| |
Sbjct 900202 AGACAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCCGG 900261
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | ||| ||||| ||| ||||| ||| | | | || ||||||| |||||
Sbjct 900262 AGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGATTC 900321
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGT 44313
|||||| | || || ||||| |||||
Sbjct 900322 CACCTCAAGGGTGATGGTCTTGCCCGT 900348
Score = 109 bits (120), Expect = 4e-19
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || ||| |||||| ||||||||||| || | || ||| |||| ||
Sbjct 899878 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTCCTC 899937
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || |||||||||| ||||||||||| | ||| | || ||||| |||
Sbjct 899938 AAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGAGGAATGCCCTCCTTGTCCTG 899997
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | ||||| || | || || || || | || || |||||
Sbjct 899998 GATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACTTCGAGGGTGATGGTCTT 900057
Query 44308 TCCCGTGAGGGTCTTCACGA 44327
|| || |||||||| ||||
Sbjct 900058 GCCGGTCAGGGTCTTGACGA 900077
>seq15
Length=634592
Score = 134 bits (148), Expect = 1e-26
Identities = 157/209 (75%), Gaps = 5/209 (2%)
Strand=Plus/Minus
Query 44131 CAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAG 44190
|| ||||||| |||| |||| ||||||||||| |||| || ||| | || |||||
Sbjct 108860 CATGTGAAGC-TGCTGACCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAG 108802
Query 44191 CTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTAT 44250
|||||| || || ||||||| ||||||||||| | || | || ||||| ||| ||
Sbjct 108801 CTGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGAT 108742
Query 44251 CTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||| ||| || ||| | |||||||| | ||| || ||||| | |||||||||||
Sbjct 108741 CTTGGACTTGACATTGT--CGATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTA 108684
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| |||||||| ||||| || |||||
Sbjct 108683 CCCGTCAGGGTCTTGACGAAAATCTGCAT 108655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990066558892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |