Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 6e-26
>seq1
Length=4116995
Score = 132 bits (146), Expect = 6e-26
Identities = 228/327 (70%), Gaps = 12/327 (4%)
Strand=Plus/Plus
Query 145534 AATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAG 145593
||||| |||| ||||| ||| | | ||| ||| |||| ||| ||||| | |||||
Sbjct 2530071 AATTACACCGACATCTTCATCGCCAAAGCCTTGTGCGGGTTGTATCCCTCAATGACAAAG 2530130
Query 145594 TCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGC-CTCAGG-------ATCCTGAGCC 145645
|||||| | | || |||| || || || ||| ||| | ||| |||||
Sbjct 2530131 TCCTCCAGCTTCCAGCCATCGATA--CTGCAGCCGGGCTCGCGTCCCTCCATCTTGAGCA 2530188
Query 145646 TGGGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGG 145704
||| || | ||| || ||| | || | || | || || | ||| ||||| | || |
Sbjct 2530189 GGGGGAAAGCCCGCGG-CTCACGCTCTATTTGCACCTGTAGCGCCTCGACGTGATCGACG 2530247
Query 145705 TAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGG 145764
|||||||||||||| |||| |||||| | | | || || | || ||||| |
Sbjct 2530248 TAGACGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGAACAAGATCCGTGGCTCGC 2530307
Query 145765 GCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATG 145824
|| | ||||| || ||||| ||||| ||| |||||||||||||| || || ||||||
Sbjct 2530308 GCAAGCATGTGTGTGAGCAGCGAGTACGAGGCAATGTTGAAGGGCACTCCAAGACCCATG 2530367
Query 145825 TCCCCCGAGCGCTGGTACAGCTGGCAG 145851
|| | ||||||||||||||||||||||
Sbjct 2530368 TCGCACGAGCGCTGGTACAGCTGGCAG 2530394
Score = 118 bits (130), Expect = 1e-21
Identities = 270/403 (67%), Gaps = 4/403 (1%)
Strand=Plus/Plus
Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925
|| ||||||||||||| | | ||| || |||||||| ||||| |||||||||
Sbjct 2530526 CGACACGTAGAACTGGGCAAACATGTGACACGGCGGCAGCGCCATCTTCTTCAGGTCCGC 2530585
Query 145926 CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTAT 145985
||| ||||| || | | | || | || | |||| | |||| | || |
Sbjct 2530586 CGGATTCCACGCACTCATAATGATGCGTCTATCGTAGGGGGTGTTCTTCAGCTTGTGCAC 2530645
Query 145986 CAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGC 146045
|| || |||||||| || ||||| ||| ||| ||||||| | || || ||| |
Sbjct 2530646 CACCTCTGCCAGCTGGTCGACACCCTGGCCCGTGTAGTCTGTCTGCGCATCGACATACTC 2530705
Query 146046 GGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTG 146105
|| || || |||| ||||||||||||||| ||||| |||| ||| || ||| |||
Sbjct 2530706 TGCGCCAAAATGCCGCCACTGGAACCCGTACACGGGGCCCAAGTCGCCCTCGGCCCGGTG 2530765
Query 146106 CCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165
||||| || | | | ||| | | || ||||||||| ||||||| ||||||| |||
Sbjct 2530766 GCCCAGGCCCACGCTGTTCAGGTACGCGCGCGACCCGTTGCCGTCCCATATCTTGATGCC 2530825
Query 146166 --CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCG 146223
| |||| ||| | || || ||| ||| |||||||| |||||||| |
Sbjct 2530826 GGCTTCGCTGAGCG-GCA-GCGATGATGTGCTACCCTCAATGAACCACAGCAGCTCGGCT 2530883
Query 146224 AGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
| || | | |||||| | ||| |||||||| || ||||
Sbjct 2530884 ATTACAGCGCGTGTGAAGACGCGCTTCGTGGTCAGGAGCGGGA 2530926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076578721200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |