Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq10 105 1e-17 >seq10 Length=914541 Score = 105 bits (116), Expect = 1e-17 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059 ||| || ||| |||| | |||| |||||||| || ||||||||||| || || ||||| Sbjct 285669 CCTGCCGCATCTGCTGCTGTACGGGCCTCCCGGCACGGGCAAGACGTCTACGATTCTGGC 285728 Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119 |||||| || | | | |||| | |||||| | || ||||| ||||||||||| Sbjct 285729 GCTGGCGCGGCGCATCTACGGCGCGCACAACATGCGGCAGATGGTGCTGGAGCTGAACGC 285788 Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 || ||||| ||||| | ||||| || ||||| | |||||||| || Sbjct 285789 CTCGGACGACCGCGGCATTGACGTGGTGCGCGAGCAAATCAAGACGTT 285836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765987271040