Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 2e-23
>seq1
Length=4116995
Score = 123 bits (136), Expect = 2e-23
Identities = 211/302 (70%), Gaps = 8/302 (3%)
Strand=Plus/Plus
Query 21110 CACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGG 21169
|||||| ||||| || | |||||| || || || |||||| | |||||||| ||
Sbjct 2530529 CACGTAGAACTGGGCAAACATGTGACACGGCGGCAGCGCCATCTTCTTCAGGTCCGCCGG 2530588
Query 21170 GTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATC---CAC 21226
|||||||| | ||||| |||||| | ||||| ||| |||| | || | |||
Sbjct 2530589 ATTCCACGCACTCATAATGATGCGTCTATCGTAGGGGG---TGTTCTTCAGCTTGTGCAC 2530645
Query 21227 CACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTC 21286
||| | ||||||||| || ||||| ||| ||||| | | || | |||||
Sbjct 2530646 CACCTCTGCCAGCTGGTCGACACCCTGGCCCGTGTAGTCTGTCTGCGCATCGACATACTC 2530705
Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTC 21346
|| |||||||| | |||||||||||||||||| || |||| ||||||||| ||||
Sbjct 2530706 TGCGCCAAAATGCCGCCACTGGAACCCGTACACGGGGCCCAAGTCGCCCTCGGCCCGGTG 2530765
Query 21347 CCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGC 21405
|| | |||| ||| | || | ||||| ||||||| ||||||| || || | ||
Sbjct 2530766 GCCCAGGCCC-ACGCTGTTCAGGTACGCGCGCGACCCGTTGCCGTCCCATATCTTGATGC 2530824
Query 21406 CG 21407
||
Sbjct 2530825 CG 2530826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427775843594400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |