Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq18 125 5e-24
>seq18
Length=564976
Score = 125 bits (138), Expect = 5e-24
Identities = 299/445 (67%), Gaps = 8/445 (2%)
Strand=Plus/Plus
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
||||| |||||||||| || || || || || | || || || | || || ||||
Sbjct 230213 CGTCTGGTGGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCGGGCGCTTTCGCCTCCATT 230272
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
||||||||| || ||| || ||||| || || | |||||||||||| |||||
Sbjct 230273 TTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCG 230332
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920
|||||||| ||||| ||| |||||||| || |||| || ||| | | | ||
Sbjct 230333 CGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTCTTCTCGCACCT-GAACACCCG 230391
Query 22921 CCGTGTCAGGACG-ATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTT 22979
|| | || || | || | | ||||| | |||||||||| |||||||| || ||
Sbjct 230392 CCCTAGCAAGAAGCTTGTTGAGGAGATCATCACCGATGCCGTTGTCATTGAGAAGGAGTT 230451
Query 22980 CTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTA 23039
| | ||||| || |||| ||||| ||||| ||| |||| | |||
Sbjct 230452 CCTGACCGAGGCTCTGCCTTGCGCCCTGCTTGGCATGAACGCCGACCTCATGAAGCAGTA 230511
Query 23040 CATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGT 23099
||| ||||||| || || || ||||| | |||||| || | | ||| || || ||
Sbjct 230512 CATTGAGTTTGTCGCCGACCGTCTGCTGGTTGCCCTTGGCAACGAGAAG--GTCTACCGC 230569
Query 23100 T--GCCAATCCATTTGATTTCATGGATAACAT-TAGCATTGAAGGTAAAACAAACTTCTT 23156
| | || || ||||| |||||||| ||||| | || | | ||||| || ||||||||
Sbjct 230570 TCCACGAACCCCTTTGACTTCATGGAGAACATCTCGC-TGGGCGGTAAGACCAACTTCTT 230628
Query 23157 TGAACGCCGTGTGAGTGAATATCAG 23181
|| ||||| |||| || |||
Sbjct 230629 CGAGAAGCGTGTTGGTGACTACCAG 230653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233469752090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |