Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq19 168 1e-36
seq18 149 9e-31
>seq19
Length=545716
Score = 168 bits (186), Expect = 1e-36
Identities = 463/704 (66%), Gaps = 24/704 (3%)
Strand=Plus/Plus
Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950
||||| || |||| || ||||||| | ||| || | | | || || || |||||
Sbjct 482288 CCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCAGCGTTCTTCTCGACACGCTTCATG 482347
Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010
|||||||| |||||||| || || | || ||||| | || | | |||||| || ||
Sbjct 482348 AAGAGATCGGGAATCCACAGCGCCAGGAAAAGATCGCGGGCGCGAACCTCCTCCTTGCCG 482407
Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070
||||| || || |||||| | | | ||| | |||||||| |||| ||| |||
Sbjct 482408 TGGTTCTTGCGCAGGTCAAGGAACTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATG 482467
Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130
|| | | || || || ||||| || ||||| || | ||| | || ||||| || |
Sbjct 482468 GCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGAAC 482527
Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190
|| | || ||| ||||| ||||| ||||| ||||| || || |||| || || |||
Sbjct 482528 ACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTTGTGCCGGCAATGTACGAGCCA 482587
Query 80191 CTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 80248
|||||||||| | ||||| |||| || || || ||||| || ||||| | |
Sbjct 482588 GTGGCACGAATGCGGTGGACATTGA--GACCGATACCACCAGCCATCTTGGAGATCATAG 482645
Query 80249 CGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAA 80308
| || || | ||||| || |||||||| || || || |||||| || || |
Sbjct 482646 CACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAGGA 482705
Query 80309 AACAGCTAGACATTTGGTGACGACTAG----TTCCCGCATTAAATAAGGTAGGAGAAGCG 80364
| || |||| | ||| | || | | ||||| || || | || || || |||
Sbjct 482706 AGCAAGAGGACA---GCTGA-GCCTGGGGCGTACCCGCGTTGAAAAGAGTGGGCGAGGCG 482761
Query 80365 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATA-----GCTGATTCTAT-A 80418
|| || || | || ||||| || ||||||||||||||| | | ||| | |
Sbjct 482762 TGGGTGAAGAACTTGCTAGACATGAGGTTGTACGTCTCAATAACACGGTCAACTCTGTCA 482821
Query 80419 TCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 80478
|||| ||| || || || |||||||| | ||||||||| || | || || |||
Sbjct 482822 CCCCA------AATGCCGACAGCAACACGCATAATCATGTGCTGGGGACGCTCGACAATC 482875
Query 80479 TTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 80538
||| | | |||| || ||| || |||| || || || ||||| || | |||
Sbjct 482876 TTGCCGTCGAGCTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAG 482935
Query 80539 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582
||||| || || || | ||| |||||| || | |||||
Sbjct 482936 TTGAAGTCACGGTCATACACAATGGCCGAGTCCAGCTCTTCCTT 482979
>seq18
Length=564976
Score = 149 bits (164), Expect = 9e-31
Identities = 368/557 (66%), Gaps = 6/557 (1%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| || || ||| ||||||||||||||| | ||| || ||||||||||| || ||
Sbjct 230364 CAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAAATCAGCTCGTTGGAAAAGGTCAGA 230305
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|||||||| || |||||||| ||||| || ||||| || || | || || ||||||
Sbjct 230304 CCGGGCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCGAAAGCGCCCGAGAAGAAG 230245
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136
|| || || || ||||||||||| || || | || || | | | ||| |||
Sbjct 230244 ATACCCTCGACGGCGGCAAAGGCCACCAGACGCTGGGCAAAGGTCGACTCGCGGTCGGAA 230185
Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196
|||||||| ||||||| |||||||| | ||||| || || || ||||| ||
Sbjct 230184 ATCCACTTGAGAGCCCAGTCGGCCTTGCGGCGAATGCAAGGAATGGTGTCGATGGCGTTG 230125
Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256
|| || ||| | | | || || | || || ||||| | || ||| |
Sbjct 230124 AACAGGTAGCTGCGCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGCAGCGAGTACGTC 230065
Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316
||||| || ||||| || || ||||| || |||||||| || | ||||||| |||
Sbjct 230064 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATC 230005
Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376
|| || || | || || || | || || || || || || ||||| || ||
Sbjct 230004 TGGACCTCACCCGAGAAACGCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGCAGCG 229945
Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTTTTCG---TTGGGTGTTAGTTTATTCCAA 50433
|| || |||| || || || || | |||||| ||| | | || |||||
Sbjct 229944 AAGAAGGCCAGGACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAG 229885
Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493
|| | | ||| || || | ||| | || || | ||||| || || ||||| |||||
Sbjct 229884 TCGTGAAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAAGAGGCCTCGGCCTTC 229825
Query 50494 TTATACATATTCCAGAT 50510
|| ||||| | ||||||
Sbjct 229824 TTGTACATCTGCCAGAT 229808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268530649200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |