Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq18 233 3e-56
seq19 188 1e-42
>seq18
Length=564976
Score = 233 bits (258), Expect = 3e-56
Identities = 569/852 (67%), Gaps = 39/852 (5%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| ||||||| || ||||||| ||| ||| | ||||||
Sbjct 229808 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACGGCCGAGGAGATTGATCTG 229867
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG---TTTATA 125135
|||||||| || |||| ||| | | || ||| | | || | || || ||
Sbjct 229868 TCCAAGGATCTTCACGACTGGAACAACCGCATGA---ACAAGGACGAAAAGTACTTCATC 229924
Query 125136 TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACA 125195
|||||| | |||||||||| || | || || || || |||||||| || || |
Sbjct 229925 TCGCACGTCCTGGCCTTCTTCGCTGCTTCGGACGGCATTGTCAACGAGAACTTGGTCGAG 229984
Query 125196 CGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255
|| ||||| ||| | || || |||| ||||| ||||| ||||| ||||||
Sbjct 229985 CGTTTCTCGGGTGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATG 230044
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA---T 125312
|| |||||| | |||||||| | |||||| || || |||| ||||| || |
Sbjct 230045 ATGGAGAACATCCACTCGGAGACGTACTCGCTGCTCATCGACACCTACATCAAGGAGCCT 230104
Query 125313 CCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372
| || || | || || || ||||| |||||||| | || | || || |||
Sbjct 230105 GCCCAGCGCAGCTAC---CTGTTCAACGCCATCGACACCATTCCTTGCATTCGCCGCAAG 230161
Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432
|| | |||| | |||||| ||| | |||| | | ||| | | ||||||
Sbjct 230162 GCCGACTGGGCTCTCAAGTGGATTTCCGACCGCGAGTCGACCTTTGCCCAGCGTCTGGTG 230221
Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492
|| || |||||||| ||||| |||||||| ||||| ||| || |||| || |||||
Sbjct 230222 GCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCGGGCGCTTTCGCCTCCATTTTCTGGCTG 230281
Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552
||||| || || |||||||| ||||| |||||| | || || || ||||||
Sbjct 230282 CGCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGTGACGAG 230341
Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCGAGTGCA 125610
|| || ||| ||||||||| || || || ||||| || | | | ||| || |
Sbjct 230342 GGTCTGCACACCGACTTTGCCTGCCTGCTCTTCTCGCACCTGAACACCCGCCCTAG-CAA 230400
Query 125611 GATCCAGC--GATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668
|| ||| | ||| || ||||| ||||||||||| || || | ||
Sbjct 230401 GA---AGCTTGTTGAGGAGATCATC---------ACCGATGCCGTTGTCATTGAGAAGGA 230448
Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGA 125728
||| || ||||| | || || | | || ||||||||||| | | || ||| |
Sbjct 230449 GTTCCTGACCGAGGCTCTGCCTTGCGCCCTGCTTGGCATGAACGCCGACCTCATGAAGCA 230508
Query 125729 GTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATTGGC--CG-CAAGATT 125783
|||||| |||||||| || || ||||| ||| |||| ||||| || ||| |
Sbjct 230509 GTACATTGAGTTTGTCGCCGACCGTCTGCTG-----GTTGCCCTTGGCAACGAGAAGGTC 230563
Query 125784 TACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAAC 125843
||| | ||| ||| |||||||| |||||| | ||| || || | ||||||||||||
Sbjct 230564 TACCGCTCCACGAACCCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGTAAGACCAAC 230623
Query 125844 TTTTTCGAGAAG 125855
|| |||||||||
Sbjct 230624 TTCTTCGAGAAG 230635
>seq19
Length=545716
Score = 188 bits (208), Expect = 1e-42
Identities = 352/509 (69%), Gaps = 6/509 (1%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || || || || | ||| | ||| |||| || |||||||||||
Sbjct 482499 CAGGGTGGCAACAAGCGCCCTGGTGCCTTTGCCATTTACCTGGAGCCGTGGCACGCGGAT 482440
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| ||||| || | || ||||||| ||| ||| || |||| || ||| | ||
Sbjct 482439 GTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGCGAT 482380
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCT-A 97054
| || || || ||| | || ||| | ||||||||||| ||| | || | ||| |
Sbjct 482379 CTTTTCCTGGCGCTGTGGATTCCCGATCTCTTCATGAAGCGTGTCGA-GAAGAACGCTGA 482321
Query 97055 CTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTT 97114
||||| ||| ||||||||| || || || || ||| | ||||||| ||||| |||||
Sbjct 482320 CTGGACCCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGATTGCTACGGCGAGGAGTT 482261
Query 97115 TGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCAC 97173
||||||| |||| ||||||||||||||||| || | | ||| || | || |
Sbjct 482260 TGAGGCCCTGTACGAAAAGTACGAGCAAGAGGGCCGTGGCCGCGCGTCGA-TCAAGGC-C 482203
Query 97174 GAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTC 97232
|||| |||||| | ||||| || ||| ||| ||||| || | |||| ||| ||
Sbjct 482202 CAGAAGCTGTGGTACGCCATTCTGGAGGCCCAGACCGAGACAGGCAACCCGTTCATGCTG 482143
Query 97233 TACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCC 97292
|||||||| | || ||||| |||||||| || |||| |||||| |||||
Sbjct 482142 TACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATCCGCAGCTCC 482083
Query 97293 AATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTG 97352
|| |||||||| || ||| | |||||| | || || ||| || || ||| |||
Sbjct 482082 AACCTGTGCACTGAGATTATTGAGTACTGTGCGCCTGATGAGGTTGCCGTGTGCAACCTG 482023
Query 97353 GCATCGGTCAATCTGCCCAAGTTTGTAGA 97381
|| ||| | |||||| |||||| ||
Sbjct 482022 GCTTCGCTGGCTCTGCCGTCGTTTGTCGA 481994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058922102800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |