Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq6 113 1e-19
>seq6
Length=1902109
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || ||||| || || || || || || || | || ||
Sbjct 701181 AGAACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTACGGCCATCC 701122
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || |||||||| || || | ||| || || ||||| || || || || |||
Sbjct 701121 TCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 701062
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| | || ||||| || | || || | ||| |||||||| || || |||
Sbjct 701061 TGAATCTTCGACTTGACATTGTCAATCGTGTCCGACGATTCGACCTCTAGCGTGATGGTC 701002
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| || || || ||||| ||||||||
Sbjct 701001 TTGCCAGTCAGCGTCTTCACAAAGATCTGCAT 700970
Score = 104 bits (114), Expect = 5e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | ||||| || ||||| || || |||||||| ||||| | ||| ||
Sbjct 700726 AAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATC 700667
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || || || || ||||| || | ||| || || ||||| || || || || ||
Sbjct 700666 CTCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTC 700607
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| | || || || || | |||||| | || || || || ||||| ||
Sbjct 700606 CTGAATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACTTCGAGAGTAATGGT 700547
Query 104527 CTTACCAGTAAGTGTTTTTACAAATAT 104553
||| || || || || || || | |||
Sbjct 700546 CTTGCCGGTGAGGGTCTTGACGACTAT 700520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397957431240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |