Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq2 111 1e-19 >seq2 Length=3643318 Score = 111 bits (122), Expect = 1e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 5593 CAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAG 5652 |||||| || | |||||||| | ||| |||||||||||| ||| | | ||||||||| Sbjct 2641589 CAGCTGAGCCACGCGGTCGCCGGCCTTGACCTCGAAATCGGTGTCGTTGTGGTTGAACAG 2641648 Query 5653 CACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712 | ||| || | ||| |||||||| || || || ||||| || ||| ||| || || Sbjct 2641649 AAGCACCTTGACTTCGCCACGGTAGTCAGCATCGATGACGCCGGCACCCGTGTCAATAAA 2641708 Query 5713 GTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 ||||||| | || ||||| || |||||||| | ||| |||| Sbjct 2641709 GTGCTTGGCGGCAAGGCCCGAACGGGGAGCAATGCGACCGT 2641749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430054242761360