Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 1e-19
>seq2
Length=3643318
Score = 111 bits (122), Expect = 1e-19
Identities = 121/161 (75%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 5593 CAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAG 5652
|||||| || | |||||||| | ||| |||||||||||| ||| | | |||||||||
Sbjct 2641589 CAGCTGAGCCACGCGGTCGCCGGCCTTGACCTCGAAATCGGTGTCGTTGTGGTTGAACAG 2641648
Query 5653 CACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712
| ||| || | ||| |||||||| || || || ||||| || ||| ||| || ||
Sbjct 2641649 AAGCACCTTGACTTCGCCACGGTAGTCAGCATCGATGACGCCGGCACCCGTGTCAATAAA 2641708
Query 5713 GTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753
||||||| | || ||||| || |||||||| | ||| ||||
Sbjct 2641709 GTGCTTGGCGGCAAGGCCCGAACGGGGAGCAATGCGACCGT 2641749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430054242761360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |