Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq6 84.2 2e-11
>seq6
Length=1902109
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGT 48593
|||||| || ||||||||||| | || || || | ||||||||||||||||| |
Sbjct 701161 CTCCTTCTGGATGTTGTAATCGGA-AAGCGTACGGCCATCCTCCAGCTGCTTACCAGCAA 701103
Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653
| || | ||||||||| ||| || | || ||||||||| ||| ||| ||||| |
Sbjct 701102 AGATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTCGACTTGACAT 701043
Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713
| || || || | || || ||| | || ||||| || || || || || ||||
Sbjct 701042 TGTCAATCGTGTCCGACGATTCGACCTCTAGCGTGATGGTCTTGCCAGTCAGCGTCTTCA 700983
Query 48714 CAAAAATCTGCAT 48726
|||| ||||||||
Sbjct 700982 CAAAGATCTGCAT 700970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421251045980030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |