Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 2e-11 >seq6 Length=1902109 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGT 48593 |||||| || ||||||||||| | || || || | ||||||||||||||||| | Sbjct 701161 CTCCTTCTGGATGTTGTAATCGGA-AAGCGTACGGCCATCCTCCAGCTGCTTACCAGCAA 701103 Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653 | || | ||||||||| ||| || | || ||||||||| ||| ||| ||||| | Sbjct 701102 AGATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTCGACTTGACAT 701043 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 | || || || | || || ||| | || ||||| || || || || || |||| Sbjct 701042 TGTCAATCGTGTCCGACGATTCGACCTCTAGCGTGATGGTCTTGCCAGTCAGCGTCTTCA 700983 Query 48714 CAAAAATCTGCAT 48726 |||| |||||||| Sbjct 700982 CAAAGATCTGCAT 700970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251045980030