Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq6 118 1e-21
>seq6
Length=1902109
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| |||| |||| ||| || ||||| || | ||| |||||| | || | |
Sbjct 701184 CGCAGAACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTACGGCCA 701125
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||||||| || || ||||||| | | ||||| || ||||||||||| || |||
Sbjct 701124 TCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTG 701065
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||| || | |||||| | | | ||||| | ||||| || | |||||||
Sbjct 701064 TCCTGAATCTTCGACTTGACATTGTCAATCGTGTCCGACGATTCGACCTCTAGCGTGATG 701005
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| || || |||||||||||||||||
Sbjct 701004 GTCTTGCCAGTCAGCGTCTTCACAAAGATCTGCAT 700970
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| |||| |||||| ||||| || | ||| || ||| | |||| ||||||
Sbjct 700950 ACCAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCCTCA 700891
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || ||| | || || | | ||||| || |||||||| || || ||||| |
Sbjct 700890 AGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 700831
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || | |||||| | | | || || | || || |||| ||||| || |||
Sbjct 700830 ATCTTCGACTTGACATTGTCAATGGTATCCGATGACTCCACCTCAAGGGTGATAGTCTTT 700771
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| || ||||||||||||||
Sbjct 700770 CCGGTAAGAGTCTTGACAAAGATCTGCAT 700742
Score = 82.4 bits (90), Expect = 7e-11
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 94818 CCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGA 94877
|||| || | ||| || ||| || |||| | |||||||||||| || || | ||||
Sbjct 107617 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 107558
Query 94878 TTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGC 94937
| | | |||||||| || ||||| || || ||||| | ||||| | |||||| |
Sbjct 107557 TCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATTTTGGACTTGACATTGT 107498
Query 94938 CGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAA 94997
||| |||||| | | || || || | || || || || || || || || || || |
Sbjct 107497 CGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGA 107438
Query 94998 AGATCTGCAT 95007
| ||||||||
Sbjct 107437 AAATCTGCAT 107428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291031890800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |