Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq19 149 6e-31 seq18 149 6e-31 seq16 118 1e-21 seq6 118 1e-21 >seq19 Length=545716 Score = 149 bits (164), Expect = 6e-31 Identities = 711/1110 (64%), Gaps = 29/1110 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| |||||||| |||| |||||||||| || | ||| || ||| | || Sbjct 481445 TTGACAACCTGGAACTCGCCAGCCAGCACACGACGCTGGTAAATGTTGGAAGTGTACGGC 481504 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| |||||||| || || | || | || || ||||| ||| | | Sbjct 481505 TCAAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGC 481564 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||||| |||| || |||||| | ||||| |||| |||| ||||| Sbjct 481565 AGAAGCGAGTTGCGCACACCGTTCTGCTTGATCTGCTCCTTGAGCGACGCCCAGTCCCAG 481624 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | ||| | || | |||||||||| |||||| ||||||| |||| Sbjct 481625 AGGTCGCTGGGCGTGACATTCCACATGTCGAACTGCAGGATGCCCTGAGAAACGGGCGAA 481684 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCG-CCTCCAGAGC 145356 || | | | | | ||| | ||| ||||| | || || | | || ||| || Sbjct 481685 CCCTCATACGTAGAGTAGGTACCCTCCTCCTTGGCAATTTC-CATCGAGGCCGTCAGGGC 481743 Query 145357 GCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTA 145416 || || || || || || || |||||||| || || | ||| | Sbjct 481744 AGCGTGGTAGATGGTTTCAAAGATCTGAGTGTTGAGCTTGCGAGCCTCGGCAGACTCAAA 481803 Query 145417 CGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCG 145476 |||||||||||| | || ||||| || || ||||| | || || || ||||| || Sbjct 481804 AGGCATGCGCAGCGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCAATGGGACG 481863 Query 145477 ATGTTTCATGTTGCTCATCCTCGCC---GACTCGATAGGATATCGATTACGGTCGATAAT 145533 || ||||||||| | ||| | | || || || | || ||| || || Sbjct 481864 GTGACGCATGTTGCTGTTGTGGGCCTCAGGCACG---GGGTAGTGGTTGACGTCAATGAT 481920 Query 145534 TTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCG 145593 |||| ||| ||||| || ||||| || | | ||| ||| | ||||| || Sbjct 481921 GCGGTTCAGGTTGCGCACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTACTC 481980 Query 145594 AGCCTCGTCAACGACCACACAGCTATTGACG-GCGATCGACGCCAAATTACAAACTGCCG 145652 || || | | ||| | | | | | || | ||| |||| || || || || Sbjct 481981 GTTCTTGTTGTAGTCGACAAA-CGACGGCAGAGCCAGCGAAGCCAGGTTGCACACGGCAA 482039 Query 145653 TCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTT 145711 ||| || |||| | | ||| | | ||||| | ||||| ||| | |||||| Sbjct 482040 CCTCATCAGGCG-CACAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTA 482098 Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771 ||||| || | ||| || || || | |||||| ||||||||| |||||| |||| | Sbjct 482099 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTTG 482158 Query 145772 CCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCTGCT 145829 || ||||| ||| | ||||| || || || || | ||| || | | | Sbjct 482159 CCTGTCTCGGTCTGGGCCTCCAGAATGG--CGTACCACAGCTTCTGGGCCTTGATCGACG 482216 Query 145830 GCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGC 145889 || |||||||||| ||||| || ||| || |||||||| | ||||||| Sbjct 482217 CGCGGCCACGGCCCTCTTGCTCGTACTTTTCGTACAGGGCCTCAAACTCCTCGCCGTAGC 482276 Query 145890 AATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGA 145949 |||| | |||||| || |||| |||||| |||||||| | ||| | |||| | || Sbjct 482277 AATCAGCCAGGCCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCAGCGTTCTTCTCGA 482336 Query 145950 CGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAAT 146009 | |||| ||| || | ||| || | ||||||||| | | ||||| || || | Sbjct 482337 CACGCTTCATGAAGAGATCGGGAATCCACAGCGCCAGGAAAAGATCGCGGGC---GCGAA 482393 Query 146010 CCTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCCA 146064 |||| | || || ||| || || | ||| | ||| | | | ||||||||||| Sbjct 482394 CCTCCTCCTTGCCGTGGTTCTTGC-GCAGGTCAAGGA-ACTCAAACACATCCGCGTGCCA 482451 Query 146065 CGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACG 146121 ||| || | || | ||| | ||| || || |||||||||||||| |||| || Sbjct 482452 CGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAGCG 482511 Query 146122 TACCATGTTGTTAAAGACGCGCACCATGGG 146151 | ||||||| || || |||| |||||| Sbjct 482512 GGCAGTGTTGTTGAACACACGCAGCATGGG 482541 >seq18 Length=564976 Score = 149 bits (164), Expect = 6e-31 Identities = 333/493 (68%), Gaps = 9/493 (2%) Strand=Plus/Plus Query 46106 CCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGG 46165 |||||||||| | |||||||| | | || |||| || ||| ||||| |||||| Sbjct 230163 CCGACTGGGCTCTCAAGTGGATTTCCGACCGCGAGTCGACCTTTGCCCAGCGTCTGGTGG 230222 Query 46166 CCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACAT-C 46224 ||||||| || ||||| |||| || || ||| ||| ||| |||| || | | | Sbjct 230223 CCTTTGCCGCCGTCGAGGGTATCTTCTTCTCGGGCGCTTTCGCCTCCATTTTCTGGCTGC 230282 Query 46225 AAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAG 46284 || | || | | |||||||| ||||| ||| |||||||||||| ||||| |||||| Sbjct 230283 GCAAGCGTGGTC-TGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGTGACGAG 230341 Query 46285 GGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCG 46344 || ||||| || |||||||| || || || | | | | || || || || | Sbjct 230342 GGTCTGCACACCGACTTTGCCTGCCTGCTCT---TCTCGCACCTGAAC-ACCCGCCCTAG 230397 Query 46345 CCCGACACCGTGCTGAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTA 46402 | || | | || |||| || ||| || || || | ||||||||||||||| | | Sbjct 230398 CAAGA-AGCTTGTTGAGGAGATCATCACCGATGCCGTTGTCATTGAGAAGGAGTTCCTGA 230456 Query 46403 CGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCG 46462 | | || ||||| |||||||| ||||||||||| | ||| | ||||| | Sbjct 230457 CCGAGGCTCTGCCTTGCGCCCTGCTTGGCATGAACGCCGACCTCATGAAGCAGTACATTG 230516 Query 46463 AGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGCGCA 46522 ||||||| || ||||| ||||| || ||| | | |||| | | | | | Sbjct 230517 AGTTTGTCGCCGACCGTCTGCTGGTTGCCCTTGGCAACGAGAAGGTCTACCGCTCCACGA 230576 Query 46523 ATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGC 46582 | || ||||| || ||| | |||||||| |||| || || || || || ||||| |||| Sbjct 230577 ACCCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGTAAGACCAACTTCTTCGAGAAGC 230636 Query 46583 GCGTCGGCGAGTA 46595 | || || || || Sbjct 230637 GTGTTGGTGACTA 230649 >seq16 Length=638914 Score = 118 bits (130), Expect = 1e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| ||| || |||||| ||||| ||||||||||| ||| ||| Sbjct 520932 CCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 520873 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||||||| || || || || ||||| ||| || ||||| | | Sbjct 520872 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 520813 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| || | ||||| ||| ||||| || || || || |||| Sbjct 520812 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 520753 Query 131225 AAATCTGC 131232 || | ||| Sbjct 520752 AACTGTGC 520745 >seq6 Length=1902109 Score = 118 bits (130), Expect = 1e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| || ||||| ||||| ||||||||||| ||| ||| Sbjct 107617 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 107558 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||| ||||| || || || || ||||| |||||| ||||| | | Sbjct 107557 TCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATTTTGGACTTGACATTGT 107498 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | ||| || | |||||| | |||| ||||| || ||||| || || || || |||| Sbjct 107497 CGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGA 107438 Query 131225 AAATCTGCAT 131234 |||||||||| Sbjct 107437 AAATCTGCAT 107428 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||| | || |||||||| || |||||||| ||| Sbjct 700968 CCACCACGGAGGCGGAGAACCAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAA 700909 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| | || | |||||||||||||||||| Sbjct 700908 AGAGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGA 700849 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | ||||| | ||||| | Sbjct 700848 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTATCCGATGACTCCACC 700789 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || ||||| ||||| || || || |||||||| Sbjct 700788 TCAAGGGTGATAGTCTTTCCGGTAAGAGTCTTGACAAAGATCTGCAT 700742 Score = 113 bits (124), Expect = 4e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | ||| |||||||| || |||||||| || Sbjct 700740 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAA 700681 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| | || | |||||||||||||||||| Sbjct 700680 AGAGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGA 700621 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | ||||| | ||||||| Sbjct 700620 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACT 700561 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 |||| |||| ||| || ||||| || || || |||| Sbjct 700560 TCGAGAGTAATGGTCTTGCCGGTGAGGGTCTTGACGA 700524 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| ||||| || | ||| | ||||||||||| || |||||||||||| Sbjct 701197 GCCACCACGCAGGCGCAGAACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCGGA 701138 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || ||||| |||||||| || || |||| | |||||||||||||||||| Sbjct 701137 AAGCGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGAGG 701078 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| || ||| ||||| | || | || || | || |||| Sbjct 701077 AATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATCGTGTCCGACGATTCGAC 701018 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || || || |||||||| Sbjct 701017 CTCTAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACAAAGATCTGCAT 700970 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| |||| || | ||| |||||||| || |||||||| ||| Sbjct 700455 CCACCACGCAGACGCAGGACTAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 700396 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||| || ||| | || | ||| |||||||||||||| Sbjct 700395 AGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATGAGACGTTGCTGGTCCGGAGGA 700336 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 700335 ATACCCTCCTTGTC 700322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012622995200