Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq19 149 6e-31
seq18 149 6e-31
seq16 118 1e-21
seq6 118 1e-21
>seq19
Length=545716
Score = 149 bits (164), Expect = 6e-31
Identities = 711/1110 (64%), Gaps = 29/1110 (3%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| ||||| |||||||| |||| |||||||||| || | ||| || ||| | ||
Sbjct 481445 TTGACAACCTGGAACTCGCCAGCCAGCACACGACGCTGGTAAATGTTGGAAGTGTACGGC 481504
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
||||| ||||||| |||||||| || || | || | || || ||||| ||| | |
Sbjct 481505 TCAAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGC 481564
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||||| |||| || |||||| | ||||| |||| |||| |||||
Sbjct 481565 AGAAGCGAGTTGCGCACACCGTTCTGCTTGATCTGCTCCTTGAGCGACGCCCAGTCCCAG 481624
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297
|| | ||| | || | |||||||||| |||||| ||||||| ||||
Sbjct 481625 AGGTCGCTGGGCGTGACATTCCACATGTCGAACTGCAGGATGCCCTGAGAAACGGGCGAA 481684
Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCG-CCTCCAGAGC 145356
|| | | | | | ||| | ||| ||||| | || || | | || ||| ||
Sbjct 481685 CCCTCATACGTAGAGTAGGTACCCTCCTCCTTGGCAATTTC-CATCGAGGCCGTCAGGGC 481743
Query 145357 GCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTA 145416
|| || || || || || || |||||||| || || | ||| |
Sbjct 481744 AGCGTGGTAGATGGTTTCAAAGATCTGAGTGTTGAGCTTGCGAGCCTCGGCAGACTCAAA 481803
Query 145417 CGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCG 145476
|||||||||||| | || ||||| || || ||||| | || || || ||||| ||
Sbjct 481804 AGGCATGCGCAGCGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCAATGGGACG 481863
Query 145477 ATGTTTCATGTTGCTCATCCTCGCC---GACTCGATAGGATATCGATTACGGTCGATAAT 145533
|| ||||||||| | ||| | | || || || | || ||| || ||
Sbjct 481864 GTGACGCATGTTGCTGTTGTGGGCCTCAGGCACG---GGGTAGTGGTTGACGTCAATGAT 481920
Query 145534 TTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCG 145593
|||| ||| ||||| || ||||| || | | ||| ||| | ||||| ||
Sbjct 481921 GCGGTTCAGGTTGCGCACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTACTC 481980
Query 145594 AGCCTCGTCAACGACCACACAGCTATTGACG-GCGATCGACGCCAAATTACAAACTGCCG 145652
|| || | | ||| | | | | | || | ||| |||| || || || ||
Sbjct 481981 GTTCTTGTTGTAGTCGACAAA-CGACGGCAGAGCCAGCGAAGCCAGGTTGCACACGGCAA 482039
Query 145653 TCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTT 145711
||| || |||| | | ||| | | ||||| | ||||| ||| | ||||||
Sbjct 482040 CCTCATCAGGCG-CACAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTA 482098
Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771
||||| || | ||| || || || | |||||| ||||||||| |||||| |||| |
Sbjct 482099 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTTG 482158
Query 145772 CCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCTGCT 145829
|| ||||| ||| | ||||| || || || || | ||| || | | |
Sbjct 482159 CCTGTCTCGGTCTGGGCCTCCAGAATGG--CGTACCACAGCTTCTGGGCCTTGATCGACG 482216
Query 145830 GCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGC 145889
|| |||||||||| ||||| || ||| || |||||||| | |||||||
Sbjct 482217 CGCGGCCACGGCCCTCTTGCTCGTACTTTTCGTACAGGGCCTCAAACTCCTCGCCGTAGC 482276
Query 145890 AATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGA 145949
|||| | |||||| || |||| |||||| |||||||| | ||| | |||| | ||
Sbjct 482277 AATCAGCCAGGCCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCAGCGTTCTTCTCGA 482336
Query 145950 CGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAAT 146009
| |||| ||| || | ||| || | ||||||||| | | ||||| || || |
Sbjct 482337 CACGCTTCATGAAGAGATCGGGAATCCACAGCGCCAGGAAAAGATCGCGGGC---GCGAA 482393
Query 146010 CCTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCCA 146064
|||| | || || ||| || || | ||| | ||| | | | |||||||||||
Sbjct 482394 CCTCCTCCTTGCCGTGGTTCTTGC-GCAGGTCAAGGA-ACTCAAACACATCCGCGTGCCA 482451
Query 146065 CGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACG 146121
||| || | || | ||| | ||| || || |||||||||||||| |||| ||
Sbjct 482452 CGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAGCG 482511
Query 146122 TACCATGTTGTTAAAGACGCGCACCATGGG 146151
| ||||||| || || |||| ||||||
Sbjct 482512 GGCAGTGTTGTTGAACACACGCAGCATGGG 482541
>seq18
Length=564976
Score = 149 bits (164), Expect = 6e-31
Identities = 333/493 (68%), Gaps = 9/493 (2%)
Strand=Plus/Plus
Query 46106 CCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGG 46165
|||||||||| | |||||||| | | || |||| || ||| ||||| ||||||
Sbjct 230163 CCGACTGGGCTCTCAAGTGGATTTCCGACCGCGAGTCGACCTTTGCCCAGCGTCTGGTGG 230222
Query 46166 CCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACAT-C 46224
||||||| || ||||| |||| || || ||| ||| ||| |||| || | | |
Sbjct 230223 CCTTTGCCGCCGTCGAGGGTATCTTCTTCTCGGGCGCTTTCGCCTCCATTTTCTGGCTGC 230282
Query 46225 AAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAG 46284
|| | || | | |||||||| ||||| ||| |||||||||||| ||||| ||||||
Sbjct 230283 GCAAGCGTGGTC-TGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGTGACGAG 230341
Query 46285 GGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCG 46344
|| ||||| || |||||||| || || || | | | | || || || || |
Sbjct 230342 GGTCTGCACACCGACTTTGCCTGCCTGCTCT---TCTCGCACCTGAAC-ACCCGCCCTAG 230397
Query 46345 CCCGACACCGTGCTGAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTA 46402
| || | | || |||| || ||| || || || | ||||||||||||||| | |
Sbjct 230398 CAAGA-AGCTTGTTGAGGAGATCATCACCGATGCCGTTGTCATTGAGAAGGAGTTCCTGA 230456
Query 46403 CGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCG 46462
| | || ||||| |||||||| ||||||||||| | ||| | ||||| |
Sbjct 230457 CCGAGGCTCTGCCTTGCGCCCTGCTTGGCATGAACGCCGACCTCATGAAGCAGTACATTG 230516
Query 46463 AGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGCGCA 46522
||||||| || ||||| ||||| || ||| | | |||| | | | | |
Sbjct 230517 AGTTTGTCGCCGACCGTCTGCTGGTTGCCCTTGGCAACGAGAAGGTCTACCGCTCCACGA 230576
Query 46523 ATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGC 46582
| || ||||| || ||| | |||||||| |||| || || || || || ||||| ||||
Sbjct 230577 ACCCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGTAAGACCAACTTCTTCGAGAAGC 230636
Query 46583 GCGTCGGCGAGTA 46595
| || || || ||
Sbjct 230637 GTGTTGGTGACTA 230649
>seq16
Length=638914
Score = 118 bits (130), Expect = 1e-21
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| ||||||||||| ||| || |||||| ||||| ||||||||||| ||| |||
Sbjct 520932 CCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 520873
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | ||||||||||||||| || || || || ||||| ||| || ||||| | |
Sbjct 520872 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 520813
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | |||||||| || | ||||| ||| ||||| || || || || ||||
Sbjct 520812 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 520753
Query 131225 AAATCTGC 131232
|| | |||
Sbjct 520752 AACTGTGC 520745
>seq6
Length=1902109
Score = 118 bits (130), Expect = 1e-21
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| || ||||| ||||| ||||||||||| ||| |||
Sbjct 107617 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 107558
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | |||||||| ||||| || || || || ||||| |||||| ||||| | |
Sbjct 107557 TCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATTTTGGACTTGACATTGT 107498
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | ||| || | |||||| | |||| ||||| || ||||| || || || || ||||
Sbjct 107497 CGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGA 107438
Query 131225 AAATCTGCAT 131234
||||||||||
Sbjct 107437 AAATCTGCAT 107428
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | ||| | || |||||||| || |||||||| |||
Sbjct 700968 CCACCACGGAGGCGGAGAACCAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAA 700909
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| | || | ||||||||||||||||||
Sbjct 700908 AGAGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGA 700849
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||||| | || | ||||| | ||||| |
Sbjct 700848 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTATCCGATGACTCCACC 700789
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || ||||| ||||| || || || ||||||||
Sbjct 700788 TCAAGGGTGATAGTCTTTCCGGTAAGAGTCTTGACAAAGATCTGCAT 700742
Score = 113 bits (124), Expect = 4e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| | || | ||| |||||||| || |||||||| ||
Sbjct 700740 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAA 700681
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| | || | ||||||||||||||||||
Sbjct 700680 AGAGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGA 700621
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | ||||| | |||||||
Sbjct 700620 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACT 700561
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|||| |||| ||| || ||||| || || || ||||
Sbjct 700560 TCGAGAGTAATGGTCTTGCCGGTGAGGGTCTTGACGA 700524
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| |||| ||||| || | ||| | ||||||||||| || ||||||||||||
Sbjct 701197 GCCACCACGCAGGCGCAGAACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCGGA 701138
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || ||||| |||||||| || || |||| | ||||||||||||||||||
Sbjct 701137 AAGCGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGAGG 701078
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| || ||| ||||| | || | || || | || ||||
Sbjct 701077 AATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATCGTGTCCGACGATTCGAC 701018
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || || || || || ||||||||
Sbjct 701017 CTCTAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACAAAGATCTGCAT 700970
Score = 93.3 bits (102), Expect = 4e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| |||||| |||| || | ||| |||||||| || |||||||| |||
Sbjct 700455 CCACCACGCAGACGCAGGACTAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 700396
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||| || ||| | || | ||| ||||||||||||||
Sbjct 700395 AGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATGAGACGTTGCTGGTCCGGAGGA 700336
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 700335 ATACCCTCCTTGTC 700322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012622995200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |