Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 3e-20
>seq1
Length=4116995
Score = 113 bits (124), Expect = 3e-20
Identities = 226/335 (67%), Gaps = 0/335 (0%)
Strand=Plus/Minus
Query 6152 ATCGACCACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTA 6211
|||| ||| |||| | | | ||||| || | || | | ||| ||||||||| ||
Sbjct 3704731 ATCGCCCAACATGGCCAACATCAACGTTAACCCCGATATCACCGACCAGTTCTACCGGTA 3704672
Query 6212 CAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCAT 6271
||| ||||| ||| | ||||| |||| || ||||| |||||||| || || ||| |
Sbjct 3704671 CAAGATGCCCCGCCTTCAGACCAAGATCGAAGGCAAGGGTAACGGTATCAAGACTGTCGT 3704612
Query 6272 TGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATA 6331
|||||| || | | ||||| || |||| | || || | || ||| || || ||
Sbjct 3704611 CGTCAACCTGTCGGCCGTCGCCCAGTCGCTGGCTCGTCCCGGTGCCCACCTGATCAAGTA 3704552
Query 6332 TTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGT 6391
||||| | || || || || ||||| | |||| | |||| |||| ||| |
Sbjct 3704551 CTTCGGTTTTGAGCTGGGTGCCCAGACCAACATTGACCCTGCTGACGACCGCTGGATCAT 3704492
Query 6392 TAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTT 6451
||||| ||||| | | |||||||||||| | ||||||| ||| ||||||
Sbjct 3704491 CAACGGTTCGCACGATACCAAGAAGCTGCAGGACCACGTCTACGGCTTCATTGTCAAGTT 3704432
Query 6452 TGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486
||| ||||| | | ||| | ||||| |||||||
Sbjct 3704431 TGTTCTGTGCAAGAAGTGCAAGAACCCCGAGACCG 3704397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334947077534930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |