Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1 113 3e-20 >seq1 Length=4116995 Score = 113 bits (124), Expect = 3e-20 Identities = 226/335 (67%), Gaps = 0/335 (0%) Strand=Plus/Minus Query 6152 ATCGACCACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTA 6211 |||| ||| |||| | | | ||||| || | || | | ||| ||||||||| || Sbjct 3704731 ATCGCCCAACATGGCCAACATCAACGTTAACCCCGATATCACCGACCAGTTCTACCGGTA 3704672 Query 6212 CAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCAT 6271 ||| ||||| ||| | ||||| |||| || ||||| |||||||| || || ||| | Sbjct 3704671 CAAGATGCCCCGCCTTCAGACCAAGATCGAAGGCAAGGGTAACGGTATCAAGACTGTCGT 3704612 Query 6272 TGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATA 6331 |||||| || | | ||||| || |||| | || || | || ||| || || || Sbjct 3704611 CGTCAACCTGTCGGCCGTCGCCCAGTCGCTGGCTCGTCCCGGTGCCCACCTGATCAAGTA 3704552 Query 6332 TTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGT 6391 ||||| | || || || || ||||| | |||| | |||| |||| ||| | Sbjct 3704551 CTTCGGTTTTGAGCTGGGTGCCCAGACCAACATTGACCCTGCTGACGACCGCTGGATCAT 3704492 Query 6392 TAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTT 6451 ||||| ||||| | | |||||||||||| | ||||||| ||| |||||| Sbjct 3704491 CAACGGTTCGCACGATACCAAGAAGCTGCAGGACCACGTCTACGGCTTCATTGTCAAGTT 3704432 Query 6452 TGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486 ||| ||||| | | ||| | ||||| ||||||| Sbjct 3704431 TGTTCTGTGCAAGAAGTGCAAGAACCCCGAGACCG 3704397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947077534930