Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq6 89.7 4e-13
>seq6
Length=1902109
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/190 (71%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||| ||||| | || || |||| || ||||| ||
Sbjct 107428 ATGCAGATTTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTCG 107487
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||||||||| || || ||| |||||| ||||| || || ||||| || || |
Sbjct 107488 GACACTATCGA--CAATGTCAAGTCCAAAATCCAGGACAAGGAGGGCATTCCCCCGGATC 107545
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||||| | || || || ||||| || | || |||| |||||| || ||| ||||
Sbjct 107546 AGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTACA 107605
Query 25177 ATATTCAAAA 25186
| || || ||
Sbjct 107606 ACATCCAGAA 107615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327841564450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |