Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq18 161 1e-34
>seq18
Length=564976
Score = 161 bits (178), Expect = 1e-34
Identities = 377/567 (66%), Gaps = 9/567 (2%)
Strand=Plus/Minus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| ||||||||||| || | ||| ||||| || || |||| ||| ||| || || |
Sbjct 230365 GCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAAATCAGCTCGTTGGAAAAGGTCAG 230306
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
||| || | ||| || || || ||||| || || || || ||| || || || ||
Sbjct 230305 ACCGGGCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCGAAAGCGCCCGAGAAGAA 230246
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
||||| || ||||| ||||| ||||| | ||| | |||||| | || | | |
Sbjct 230245 GATACCCTCGACGGCGGCAAAGGCCACCAGACGCTGGGCAAA---GGTCGACTCGCGGTC 230189
Query 93271 G---ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
| ||||| || | |||||| ||||| || ||| ||||| | || ||||| ||
Sbjct 230188 GGAAATCCACTTGAGAGCCCAGTCGGCCTTGCGGCGAATGCAAGGAATGGTGTCGATGGC 230129
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
||| || ||||| |||| | | | || ||||| || ||||| | ||| || ||
Sbjct 230128 GTTGAACAGGTAGCTGCGCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGCAGCGAGTA 230069
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
| | || || |||| |||||||| || ||||| |||||||| || | || || |
Sbjct 230068 CGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGG 230009
Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507
|||||| || || || || | ||| || | || || ||||| || || || || ||
Sbjct 230008 GATCTGGACCTCACCCGAGAAACGCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGC 229949
Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATC 93564
|| || || |||| | ||| || || | || || || | || | | || |
Sbjct 229948 AGCGAAGAAGGCCAGGACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTT 229889
Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
||| ||| ||||| || || ||||| | || ||| | ||||| || || || || ||
Sbjct 229888 CCAGTCGTGAAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAAGAGGCCTCGGC 229829
Query 93625 TTTTTTGTACATATCCCATATGTCTTG 93651
|| |||||||| | ||| || | |||
Sbjct 229828 CTTCTTGTACATCTGCCAGATCTGTTG 229802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860591177200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |