Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq18 434 2e-116
seq19 358 1e-93
>seq18
Length=564976
Score = 434 bits (480), Expect = 2e-116
Identities = 622/862 (72%), Gaps = 32/862 (4%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| |||||||||||||| |||
Sbjct 229808 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACGGCCGAGGAGATTGATCTG 229867
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAA 42415
||||||| || |||| | || | ||| | ||||||||| ||| ||
Sbjct 229868 TCCAAGGATCTTCACGACTGGAACA-ACCGCATGAACAAGGACGAAAAGTACTTCATCTC 229926
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|| | |||||||||||||| || || |||||||| ||||| |||||| ||| | |
Sbjct 229927 GCACGTCCTGGCCTTCTTCGCTGCTTCGGACGGCATTGTCAACGAGAACTTGGTCGAGCG 229986
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
||| | ||||| ||| | ||||| ||||||||||||||||||||||| ||
Sbjct 229987 TTTCTCGGGTGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 230046
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592
|||||| | ||||| ||| |||| | ||||||| |||| |||||| ||| ||
Sbjct 230047 GGAGAACATCCACTCGGAGACGTACTC---GCTGCTCATCGACACCTACATCAAGGAGCC 230103
Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652
| | |||| | | |||||||| ||||| || || || || ||||| |||||
Sbjct 230104 TGCCCAGCGCAGCTACCTGTTCAACGCCATCGACACCATTCCTTGCATTCGCCGCAAGGC 230163
Query 42653 GGACTGGGCGCTCAACTGGAT---CGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGT 42709
|||||||| ||||| ||||| ||| | ||| | || || | | || | |||||
Sbjct 230164 CGACTGGGCTCTCAAGTGGATTTCCGA---CCGCGAGTCGACCTTTGCCCAGCGTCTGGT 230220
Query 42710 AGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT 42769
|||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct 230221 GGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCGGGCGCTTTCGCCTCCATTTTCTGGCT 230280
Query 42770 ---CAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826
||||| ||| | ||||||||| || ||||| || ||||| || || | ||
Sbjct 230281 GCGCAAGC--GTGGTCT-GATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGTGA 230337
Query 42827 CGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC 42886
|||||| ||||| | |||||||||||||| || |||||| ||||| | ||| |||
Sbjct 230338 CGAGGGTCTGCACACCGACTTTGCCTGCCTGCTCTTCTCG---CACCTGA-ACACCCGCC 230393
Query 42887 CTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCC 42945
|| | ||| ||| || || |||||||| || ||||| | || |||||||||||||
Sbjct 230394 CTAGCAAGAAGCTTGTTGAGGAGATCATCACCGATGCCGTTGTCATTGAGAAGGAGTTCC 230453
Query 42946 TCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACA 43005
| || || | ||||| ||||| | ||||||||| |||||||||| ||||||
Sbjct 230454 TGACCGAGGCTCTGCCTTGCGCCCTGCTTGGCATGAACGCCGACCTCATGAAGCAGTACA 230513
Query 43006 TCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGGTCTCAGCCGCCTCTACAACAC 43063
| ||| |||||||||| ||| ||| |||| ||| || | ||||| | |
Sbjct 230514 TTGAGTTTGTCGCCGACCGTCTGCTGGTTGCC-CTTGGCAACGAGAAG-GTCTACCGCTC 230571
Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123
|| |||||| ||||| ||||||||||||||| ||| || ||||||||||| |||||
Sbjct 230572 CACGAACCCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGTAAGACCAACTTCTTCGA 230631
Query 43124 GAAGCGCGTCGCCGACTACCAG 43145
|||||| || | |||||||||
Sbjct 230632 GAAGCGTGTTGGTGACTACCAG 230653
>seq19
Length=545716
Score = 358 bits (396), Expect = 1e-93
Identities = 1224/1887 (65%), Gaps = 67/1887 (4%)
Strand=Plus/Plus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||| | ||| || | || |||| || | ||||||||||||||| |||||||| |
Sbjct 481107 TGAACTGAATGGGCGCCGCAGCCGCCTGCGTACGCAGGTAGTACATGCCCGTCTTGAGAC 481166
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
| |||| | | ||||||| || | ||| |||| | ||||| |
Sbjct 481167 CCAGCTTCCAGCCCGCAAAGTGCATGCTGGTAATCTTGCCCATCGTA------GGGTCCT 481220
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920
| | ||| | ||||| |||||| |||||||| |||| | || || || |
Sbjct 481221 TCATGT---GAATG---TTGAGCGACTGGGACTGGTCGATAAAGGCACCACGATCAGCAG 481274
Query 243921 CCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979
|||| | | || | ||| || ||||| || | |||||||| | | |||||
Sbjct 481275 CCATCTGCACAACCGTACG-CTGCGAAATCTCCCACACAGTCTTGTACAGCGCCTTGATA 481333
Query 243980 TGCTCGGGGAACCCTTCGA-TGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG 244038
| ||||| || || || ||||||| | || || || | | |||| || |
Sbjct 481334 TCGTCGGG-AATGCTGGGAATGTTCTGGATAGATCCGTTCTCCGCAATGATGCGGTTCTT 481392
Query 244039 CATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---GTTCAC 244095
|||||| || |||||| |||| | | |||| | || ||| ||| ||| ||
Sbjct 481393 CATGTTGTCCGACCACAGACCCAGGTCCACCAGATCA-CG--CAGCAGCCAAGGGTTGAC 481449
Query 244096 CACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGAT 244155
||||| ||||| || | |||||| || |||||||| | |||| || |||||| |
Sbjct 481450 AACCTGGAACTCGCCAGCCAGCACACGACGCTGGTAAATGTTGGAAGTGTACGGCTCAAA 481509
Query 244156 GCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAG 244215
|| ||| |||||||||| ||||||| |||||| || |||||||| |||| | ||| ||
Sbjct 481510 GCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGCAGAAG 481569
Query 244216 ACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCC 244275
||| | ||| |||| | || ||| | ||||| |||||||||
Sbjct 481570 CGAGTTGCGCACACCGTTCTGCTTGATCTGCTCCTTGAGCGACGCCCAGTCCCA------ 481623
Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGG 244335
|||||| | | ||| ||||||||| |||||||| | |||| |||||
Sbjct 481624 ---GAGGTCGCTGGGCGTGACATTCCACATGTCGAACTGCAGGATGCCCTGAGAAACGGG 481680
Query 244336 GCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCT--CGTCG 244393
||||| || || | ||||| ||| || || ||| | || || | ||||
Sbjct 481681 CGAACCCTCATACGTAGAGTAGGTACCCTCCTCCTTGGCAAT-TTCCATCGAGGCCGTC- 481738
Query 244394 AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG 244453
||||| |||| ||||||||| || |||||| |||| | | ||| |||| | | |
Sbjct 481739 AGGGCAGCGTGGTAGATGGTTTCAAAGATCTGAGTGTTGAGCTTGCGAGCCTCGGCAGAC 481798
Query 244454 GTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATG 244513
|| || |||| || | || |||| | || ||||| ||||| || || | || |||
Sbjct 481799 TCAAAAGGCATGCGCAGCGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCAATG 481858
Query 244514 GGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATC 244573
|| | ||| ||| ||||| | ||| || ||||||||||| |||| |||| ||
Sbjct 481859 GGACGGTGACGCATGTTGCTGTTGTGGGCCTCAGGCACGGGGTAGTGGTTGACGTCAATG 481918
Query 244574 ACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTAC 244633
| ||| |||||||| | | | ||| ||| |||| ||| |||||||||
Sbjct 481919 ATGCGGTTCAGGTTGCGCACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTAC 481978
Query 244634 TCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGG 244693
|||| || | | || || |||||| || || | ||||||
Sbjct 481979 TCGTT------CTTG----TTGTAGTCG--ACAAACGACGGCAGAGCCAGCGAAGCCAGG 482026
Query 244694 TTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTG 244753
||||| ||||| ||||| || | ||||| | |||||| ||||| ||||| |
Sbjct 482027 TTGCACACGGCAACCTCATCAGGCGCACAGTACTCAATAATCTCAGTGCACAGGTTGGAG 482086
Query 244754 CACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGC 244813
| |||||| ||||||| || || ||| |||| ||||||| ||||||||| |||
Sbjct 482087 CTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGC 482146
Query 244814 ATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCC 244873
||||| || || |||||| |||||| | || | | || ||| || | | |||
Sbjct 482147 ATGAACGGGTTGCCTGTCTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCTGGGCC 482206
Query 244874 TTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCG 244933
|||| || | ||| | ||||||| |||||| |||||||||||| |||||
Sbjct 482207 TTGATCGACGCGCGGCCACGGCCCTCTTGCTCGTACTTTTCGTACAGGGCCTCAAACTCC 482266
Query 244934 GGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCG 244993
||| || || | ||||| |||||| |||||||| || |||| || ||
Sbjct 482267 TCGCCGTAGCAATCAGCCAGGCCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCAGCG 482326
Query 244994 CCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTG 245053
| || ||| | || ||||||||| ||||| ||||| || ||| |||| || || | |
Sbjct 482327 TTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCACAGCGCCAGGAAAAGATCGCGG 482386
Query 245054 GTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACG 245113
| | ||| ||| ||| |||||| | ||| || | || ||||| || || ||
Sbjct 482387 GCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAACACATCCGCG 482446
Query 245114 TGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACC 245173
||||| ||||||| ||| | || | ||| || || ||||||||||| |||||||| ||
Sbjct 482447 TGCCACGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACG 482506
Query 245174 ATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTT 245232
| | || | |||||| | ||||| | || | || ||||| ||| |||||
Sbjct 482507 TAGCGGGC-AGTGTTGTTGAACACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTT 482565
Query 245233 GGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTC 245288
||||| ||||| | ||| || | | | ||| | ||||||| || | |
Sbjct 482566 TGTGCCGGCAATGTACGAGCCAGTGGCAC---GAATGC-GGTGGACATTGAGACCGATAC 482621
Query 245289 CGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGC 245348
| || || ||||||||| | || || |||||| || || |||||||| ||
Sbjct 482622 CACCAGCCATCTTGGAGATCATAGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCG 482681
Query 245349 TGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGT 245408
||| |||||||| | ||| ||||| ||||||||||| | || ||| | | || ||
Sbjct 482682 AGTCTTCCTTCATGTCAACCAGGAAGCAAGAGGACAGCTGAGCCTGGGGCGTACCCGCGT 482741
Query 245409 TGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGA 245468
|||| |||||||| ||||||||| ||| | ||| || | || |||||||| |
Sbjct 482742 TGAAAAGAGTGGGCGAGGCGTGGGTGAAGAACTTGCTAGACATGAGGTTGTACGTCTCAA 482801
Query 245469 GCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCA--CCTCATGAGGGTGTGCTG 245526
| | ||| | |||| || | ||| | ||| | ||| | |||||||
Sbjct 482802 TAACACGGTCAACTCTGTCACC--CCAAATGCCGACAGCAACACGCATAATCATGTGCTG 482859
Query 245527 GGGCGTCTCG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTT 245583
||| |||| || || ||| | ||| |||| ||| || ||||| || |||||
Sbjct 482860 GGGACGCTCGACAATCTTGCCGTCGAG---CTTCAGCAGGTACGAACGCTCCAGGGTCTT 482916
Query 245584 GAACCCAAAGTACGAGTAGCCAAAGTC 245610
||| ||||||||| |||| |||||
Sbjct 482917 GAAGCCAAAGTACTGGTAGTTGAAGTC 482943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338845872800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |