Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 3e-28
>seq1
Length=4116995
Score = 140 bits (154), Expect = 3e-28
Identities = 197/277 (71%), Gaps = 0/277 (0%)
Strand=Plus/Plus
Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431
|||| |||||| ||||| ||||||||| | || ||||||||| |||||||||| ||||
Sbjct 2530545 AACATGTGACACGGCGGCAGCGCCATCTTCTTCAGGTCCGCCGGATTCCACGCACTCATA 2530604
Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491
||||| | |||||||| || | || || | | ||| | | | || |||||
Sbjct 2530605 ATGATGCGTCTATCGTAGGGGGTGTTCTTCAGCTTGTGCACCACCTCTGCCAGCTGGTCG 2530664
Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551
| |||||||| || ||||| | | ||| || || ||| | || ||||| |||| ||||
Sbjct 2530665 ACACCCTGGCCCGTGTAGTCTGTCTGCGCATCGACATACTCTGCGCCAAAATGCCGCCAC 2530724
Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCC 20611
||||| ||||| || || ||||| || ||||| | ||| ||||||| | | |
Sbjct 2530725 TGGAACCCGTACACGGGGCCCAAGTCGCCCTCGGCCCGGTGGCCCAGGCCCACGCTGTTC 2530784
Query 20612 AGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648
||| || | | || || || ||||||||||||||
Sbjct 2530785 AGGTACGCGCGCGACCCGTTGCCGTCCCATATCTTGA 2530821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441372634485200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |