Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 140 3e-28 >seq1 Length=4116995 Score = 140 bits (154), Expect = 3e-28 Identities = 197/277 (71%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 |||| |||||| ||||| ||||||||| | || ||||||||| |||||||||| |||| Sbjct 2530545 AACATGTGACACGGCGGCAGCGCCATCTTCTTCAGGTCCGCCGGATTCCACGCACTCATA 2530604 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491 ||||| | |||||||| || | || || | | ||| | | | || ||||| Sbjct 2530605 ATGATGCGTCTATCGTAGGGGGTGTTCTTCAGCTTGTGCACCACCTCTGCCAGCTGGTCG 2530664 Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551 | |||||||| || ||||| | | ||| || || ||| | || ||||| |||| |||| Sbjct 2530665 ACACCCTGGCCCGTGTAGTCTGTCTGCGCATCGACATACTCTGCGCCAAAATGCCGCCAC 2530724 Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCC 20611 ||||| ||||| || || ||||| || ||||| | ||| ||||||| | | | Sbjct 2530725 TGGAACCCGTACACGGGGCCCAAGTCGCCCTCGGCCCGGTGGCCCAGGCCCACGCTGTTC 2530784 Query 20612 AGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648 ||| || | | || || || |||||||||||||| Sbjct 2530785 AGGTACGCGCGCGACCCGTTGCCGTCCCATATCTTGA 2530821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372634485200